Daucus carota (carrot): 108216189
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Entry
108216189 CDS
T05350
Name
(RefSeq) LOW QUALITY PROTEIN: lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108216189
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dcr01007
]
108216189
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108216189
Enzymes [BR:
dcr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
108216189
Amino acid related enzymes [BR:
dcr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
108216189
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108216189
Prokaryotic type
Other AARSs
108216189
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
108216189
NCBI-ProteinID:
XP_063948290
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All DBs
Position
4:47870718..47875611
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AA seq
654 aa
AA seq
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MAEHLGRSENSYNFGYYMIGSDQELKSRIIQLGQASAQILLEISGLFVVIISNILIYVIF
LVLFLLQLYENCVILPSISNVDDKTIEEDVASLSVADSATTLPEAGTLSKNALKKELKNQ
QREEERRRKEEEMAAAASSNGHESLAAVDDDMDPTQYFDNRIKALGALKAAGINPYPQEF
NEVMPVKEYVDKYSYLNSRERLENVQVSLAGRIMNKRASSSKLFFYDLHGDGAKVQLMID
ARISDFSEAEFTKIRGVKRGDIVVVDGFPGKSRRGELSMFPKSFTVVSHCLRMMPYVLKD
QETRYRQRDLDLILSPGVRHNFETRAMIIVYVRRFLGNLDFLEVETPMMNMFAGGAAARP
FETYHNDLKMRLNMRIAPELHLKRLVVGGFNRVYEIGKQFRNEGIDLTHNPEFTTVEFYM
AFADYKSLIEITEQMLSGMVKELTGGYKIRYHANGRENEAIEIDFTSPFRRIDMIEELEK
MSGLDIPKDLASDEANKYLAEACTKFEIKCAPPLTTARLLDKLVGHFLEETCVNPTFIMN
HPKIMSPLAKSHRSEPGLTERFELFVNKHELXNAYTELNDPVEQRQRFADQLKDRQSGDD
EAMDLDESFLTALEHGLPPTAGWGMGIDRLAMLLTDSQNIKEVILFPLMKPQDV
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacacttgggaagaagtgaaaacagttacaattttggatattacatgattggt
tctgaccaagaacttaagtccagaatcatccaacttggtcaagcctctgcgcagattttg
ttggaaatctcgggtttatttgtagtgataatatccaatattcttatatatgtaattttt
cttgttttgtttctactgcagctttatgaaaattgtgttatactcccatctataagtaat
gtggatgataaaacaatcgaagaagatgttgccagtctctctgttgccgattctgctacg
actctgccagaagccggcactcttagcaagaatgctttgaagaaagaattgaagaatcag
cagagagaggaggaaaggcgacgcaaagaagaagaaatggctgctgcggcgagctctaat
ggacacgagtccttggcagctgttgatgatgacatggatccaacgcaatattttgataac
agaattaaagcactcggtgctcttaaagcagccggaataaatccatatcctcaagagttc
aacgaggtgatgcctgtcaaagaatatgtagacaagtattcttacctaaattccagggaa
cgtctggagaatgtccaagtatcacttgcaggacgtattatgaacaaaagggcatcatcg
tctaagcttttcttttatgatttgcacggtgatggtgccaaagtgcaattaatgatcgat
gcaaggatctctgatttcagtgaagctgaatttacaaagatccgtggcgtgaagcgtgga
gatattgttgtggttgatggctttccaggtaaaagcagaaggggggaactgagtatgttc
cccaaatcattcacagtggtgtctcattgtctgcgaatgatgccttatgttttaaaggat
caggaaactagatatcgtcaacgggatctggatctgatattaagcccaggcgtacgacac
aattttgagacccgcgcgatgatcattgtttatgttagacgattccttggtaatctagat
tttctggaggtcgaaacgcctatgatgaacatgtttgctggaggagcagctgcacgtcca
tttgaaacttatcacaatgatttgaaaatgaggcttaatatgcgtatagcgcctgagcta
catctcaagcgacttgttgtaggtggatttaaccgtgtctatgaaattgggaagcagttc
aggaacgaagggatcgacttaacacataaccccgagttcactacagttgagttctatatg
gcttttgcagactacaaaagcctgattgagattacagaacaaatgttgagcggaatggtc
aaggagctgacaggaggttataaaattagatatcatgccaatggcagagagaatgaagca
attgaaatcgacttcacttcccctttcaggaggattgatatgatcgaagagttggagaag
atgtctggtctcgacattcccaaggaccttgctagcgatgaagccaacaaatatttggct
gaggcgtgcacaaagtttgagatcaaatgcgcgcctcctctgacaacagctcgcttgttg
gacaaactagtcgggcactttctggaggagacttgtgtgaaccctacgttcattatgaat
catcctaagataatgagtcccctggcaaagtcgcatagatctgagccaggcctgaccgaa
cgatttgaattattcgtcaacaaacatgaactttgaaatgcttacacggagctgaatgat
ccggtggaacagcgacagcggttcgcagatcaattaaaggatcgtcaatcaggcgatgat
gaagcaatggacttggatgaatcgttcttaacagctcttgaacatggactacctccgacg
gctgggtggggaatgggaatcgatcggcttgcaatgttgctcacagattcacagaatatc
aaggaagttatactctttccactcatgaagccacaggatgtatga
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