Daucus carota (carrot): 108216308
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Entry
108216308 CDS
T05350
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.10
KO
K14487
auxin responsive GH3 gene family
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108216308
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
108216308
NCBI-ProteinID:
XP_017244523
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Position
4:48918468..48921618
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AA seq
616 aa
AA seq
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MEPALLSCTTNADASKVMDGGFDGDDDSTVINWFESVAEKAGEVQTETLCRILRLNYGVE
YLKKWLGDIDVEDLDDCALEALYTCLVPLASHADLESYIHRIADGDKSPLLTQQPITTLS
LSSGTTDGRQKYVPFTRHSSRTTLQIFRLAAAYRSRVYPIKEGGRILEFIYSSKQKQTEG
GLKTGTATTHYFASKEFKTKQEKTKCYTCSPEAVISSGDYKQSTYCHLLLGLFYSNQVEF
IASTFSYSIVQAFTSLEEHWRDLCSDIKHGSLNSRIVTIPKTRKAVLDIISPNPRLASRI
ETICEELEREGWYGLITKLWPNAKYVYSIMTGSMQAYHKKLQHFAKDLPLVSADYGSTES
WIGVNIDPSAPPENVTFAVIPTFSYYEFIPLHRYNRECSCNTSATDDNGYKEGEPVPLSR
VKAGQQYEIVLTTFTGLYRYRLGDVVEVAGFHKGTPKLNFVCRRKLILAINIDKNTEKDL
QVVVDKGAQLLMRKAKAELVDFTSHANVDTQPGHYVIYWEIKGDVDKGVFEECCREMDAS
FVDPGYIVSRKTSSIGPLELCILERGTFMKILEYFIGNGGALSQFKTPRCTSDQGLLAIL
NACTIQRFYSAEYGSE
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggaaccagctcttcttagttgtactactaatgcagatgccagcaaggtcatggacggg
ggtttcgatggagacgatgacagtactgtcatcaattggttcgaaagcgtggccgaaaaa
gctggggaagttcagacggagacgctgtgccggatcctcaggctcaactatggggtagag
tatctgaagaaatggttaggagatattgatgttgaagatctggatgattgtgctttggag
gcattgtatacttgtttagtgcccctggcaagccatgcagatttggagagctatatccac
agaattgccgatggagacaaatctcctcttcttactcaacaacccatcactactctctcc
ttgagctctggaaccacagatggacgtcagaaatacgtaccctttactcgccatagctcc
aggaccactctccagatttttaggttagccgcagcatatagatcaagggtttatccgata
aaagaaggggggagaattctagagtttatatacagcagcaaacagaagcaaacagaggga
ggcttaaaaaccgggacagccacaactcattacttcgcaagtaaagagttcaaaactaaa
caagagaaaaccaagtgttatacatgcagcccggaagctgtgatctcgagtggagattat
aagcaatctacttactgtcacctcctcctcggcctcttctactcgaaccaagtcgaattc
attgcctccacattttcatacagcatagtccaggccttcacctcactcgaagagcattgg
cgagatttgtgcagtgacatcaaacacggtagcctcaattcaagaatcgttacaattcca
aaaacacgaaaggctgtgttggatatcatttcccctaaccctcgtctagcctctcgaatt
gaaaccatttgtgaggaattagaacgagaagggtggtatggcctaattacgaagctatgg
ccgaatgcaaaatatgtgtactctattatgacaggctcaatgcaagcgtaccacaagaaa
ttacagcatttcgcgaaagatttgccattggtgagtgcagattatggatccacggagagt
tggatcggggtgaacatcgatccctctgctccaccggagaatgtgacatttgcagtcatt
ccgacattctcttattatgaatttataccgcttcatagatacaaccgagagtgtagttgc
aatacttcagctactgatgataatggctacaaagaaggtgaacctgtacctctttcgaga
gtcaaagctggacagcaatatgagattgtgcttactacttttacagggctttataggtac
agattaggagatgtggtggaagtggctggttttcacaagggaactccaaaactaaatttt
gtatgcaggaggaagctcatcctggcaataaatatcgacaaaaatacagaaaaagatctc
caagtagtggtcgacaagggtgcacaattgctgatgaggaaggccaaggccgagctagtt
gatttcactagccacgctaatgtagacactcaacctggccactatgtaatttactgggaa
atcaaaggagatgttgacaaaggcgtgtttgaagaatgctgcagagaaatggatgcatca
tttgtggatcctggctatattgtatcaagaaaaaccagttcgattggacctttagagctc
tgtatcttggagaggggtacttttatgaaaatcttggagtattttatagggaatggagga
gccctgagccaatttaagactccgaggtgcacgagtgatcaaggtttacttgctatactt
aatgcatgcaccattcagaggttctacagtgctgagtatggctcagaataa
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