Daucus carota (carrot): 108216545
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Entry
108216545 CDS
T05350
Name
(RefSeq) protein SHI RELATED SEQUENCE 1
KO
K27807
short internodes/stylish family transcription factor
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcr03000
]
108216545
Transcription factors [BR:
dcr03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
108216545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
108216545
NCBI-ProteinID:
XP_017244825
UniProt:
A0A165Y396
LinkDB
All DBs
Position
4:42387341..42389586
Genome browser
AA seq
370 aa
AA seq
DB search
MSGFFTLAGRDQEQEDHKNNSIANSLFLFRNEEIYDKNFELWQQYYQLHHQPKQTHQDVD
LSLVGCSSGSSNPRPSTIHHNNLNAFTITTEDEPSLVYNRVANNNNNRSPTNSSSGFGVM
MRPSGGNYGGGNDGNNNNMGSSSSIGTINCQDCGNQAKKDCMHMRCRTCCKSRGFQCQTH
VKSTWVPAAKRREKQQQLLLGGSLQQQQNYQQQNQQLSLIRGESTTPKRPRENPLACTRL
PTHTSGLEVGHFPAEVNSPAVFRCVKVSAMDEADEQFAYQTAVNIGGHVFKGLLYDQGAE
NSSHRYGVVGESSSTVAAIQQPLNLITSGTSTGPTTTNNPPGVTWIDPSIYPTPLNAFMA
GTQFFPPPRS
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtctggttttttcacactagctgggagagatcaagagcaagaagaccacaaaaacaac
agcatagccaacagcttgtttttgttcagaaacgaagagatctacgacaagaatttcgag
ctatggcaacaatactatcagctccatcatcagcccaagcaaactcaccaagatgtggat
ctctcgctcgtgggatgctcttcaggttcttctaatccaagaccatctacaatccaccac
aataatctcaatgcttttaccataaccacagaggatgagccatctttagtttacaatagg
gttgctaataataacaataacagatcacccacaaactcatcatcaggatttggtgtgatg
atgaggccttctggaggaaactacgggggaggaaatgatggtaataataataatatgggg
agtagcagtagcattggaactataaattgccaagattgtggtaaccaagcgaagaaagac
tgtatgcacatgaggtgcaggacttgttgtaagagccgagggtttcagtgccagacccat
gtcaagagcacttgggttcctgcagctaaacgccgagagaaacaacaacaattgcttctt
ggcgggtctttacagcagcagcaaaactatcagcagcagaatcagcagctgagtttgatc
agaggagagtccacgactcctaaaaggccaagggaaaatccactggcttgcactcgttta
cccactcacacatcagggttagaagtgggtcatttcccggcggaggtgaattctccggcg
gtgtttcgttgcgtgaaagtgagtgccatggacgaggcagacgagcagtttgcgtaccaa
acagccgtcaacatcggaggccatgtcttcaaaggccttctttacgatcaaggcgcggaa
aacagcagccatcgatacggtgtcgttggtgagagctcctcgactgtggctgccattcag
cagccacttaatctcatcacttctggcacctccaccggaccaaccacgacaaacaatccg
cccggggtcacttggatcgacccttcaatctatccaactccgctcaatgctttcatggct
ggtacgcaattttttccaccaccaagatcttga
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