Daucus carota (carrot): 108216675
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Entry
108216675 CDS
T05350
Name
(RefSeq) LIMR family protein At5g01460
KO
K14617
LMBR1 domain-containing protein 1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
108216675
04980 Cobalamin transport and metabolism
108216675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108216675
Membrane trafficking [BR:
dcr04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
108216675
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
TMEM237
DUF7801
Uso1_p115_C
TPR_MLP1_2
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
108216675
NCBI-ProteinID:
XP_063947067
LinkDB
All DBs
Position
4:complement(28212672..28219209)
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AA seq
510 aa
AA seq
DB search
MGDFNLALLLIAIIVSFLVFIINIYLLINYQHPDDKNQAYFPKFVVVLGLTVSLLSILML
PADVANRQACKHAVYNGACNFTLPMKDLWLAVYIVDVVLVFFFVPFAMFYYEGDQDKSVG
KRLKSALAWVGTSAVVVALVLGILYGLVGKVDFTVRHLTSATESFPSTWSSFTSGQQCIG
NGARECSAFTGDSSLETTWTKHATFPEYIVALATIVGSVLFSIFGGVGIACLPLGLIFSF
VRRPKAVITRSQYIKEATELGKKARELKKAADALHQEEKSGSKGSKWRKNTKALEKEVHL
LEEDVKALEEMYPQGEQAETTWAMTVLGYLAKLVLGVLGLVVSIAWIIHIVIYLLIDPPL
SSFLNEVFIKLDDIWGLLGTAAFAFFCLYLLLAVIAGATMLGLRLVFITIHPMKWGATLM
NSFLFNVGLILLCSISVIQFCSTAFAYYAQATSAQEIFGHTLQSLRGIKYLYKYNVFQIT
FIVLAGLTFVYYAALGWRRKKPRGRFQLSS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatttcaatctcgctctcctactcatagcaatcatcgtctccttcctcgttttc
atcatcaacatttatctcctgatcaattatcaacaccccgatgataagaaccaagcttat
ttccccaaatttgtagttgttctcggcttgactgtctcgcttttgtcgattctcatgttg
cctgctgacgtggccaatcggcaagcttgtaaacacgctgtttacaacggagcttgcaat
ttcacgctgccgatgaaggatttgtggctcgcggtttatatcgttgatgtcgtgctcgtg
tttttcttcgttccatttgcgatgttttattacgagggcgatcaggataagagtgtaggg
aagcggttgaagagtgcgttggcgtgggtgggtacgagtgcggtggttgtggctcttgtg
ctcgggattctgtacggtcttgttggaaaagtagacttcactgttagacacctcacttct
gccacagagtcctttcccagtacttggtcaagttttacaagtggccagcaatgtattgga
aatggtgcacgtgagtgttctgcattcactggcgattcttcattagaaacaacttggaca
aagcatgccactttcccagaatatattgttgctctggccacaattgttggctctgtactt
ttctcaatatttggcggtgttggaattgcttgtttaccgctgggacttatcttttccttc
gtaaggcgtccgaaggctgttattactcgctcacaatatatcaaggaagctacagaacta
ggtaagaaggccagggaattgaagaaagctgccgatgctttgcatcaggaagaaaaaagt
ggatctaaaggaagcaagtggcgtaaaaataccaaagcattagaaaaggaggtgcatctt
cttgaagaagatgtcaaggcattagaagaaatgtatcctcaaggtgaacaggccgagaca
acatgggctatgactgttcttgggtatttggccaaacttgtgttgggagttttggggttg
gtggtgtcaattgcttggattatacatattgtgatatatctattgattgatccccctctt
tcttcatttttaaatgaggttttcattaagttggatgacatttggggtctgctgggcact
gctgcatttgcattcttctgcctgtatcttctgcttgctgtgattgctggggcaacgatg
ctgggcttgagattggtttttatcaccatacatcctatgaagtggggagcaactctcatg
aactcctttctcttcaatgtcggtctcattcttctttgctccatcagtgtcattcagttc
tgttccactgcatttgcatactatgctcaagctacctctgctcaagaaatatttggtcac
accttgcaatctctccgtgggatcaaatatctatacaagtataacgtgttccaaattaca
tttattgttttagccggattgacatttgtgtactacgcagccttgggctggagaagaaaa
aagcccagaggcaggttccaactttccagttga
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