Daucus carota (carrot): 108216749
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Entry
108216749 CDS
T05350
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108216749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108216749
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108216749
03012 Translation factors [BR:
dcr03012
]
108216749
04131 Membrane trafficking [BR:
dcr04131
]
108216749
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108216749
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
108216749
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108216749
Translation factors [BR:
dcr03012
]
Eukaryotic type
Elongation factors
108216749
Membrane trafficking [BR:
dcr04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
108216749
Exosome [BR:
dcr04147
]
Exosomal proteins
Proteins found in most exosomes
108216749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
FlpD
GTP_EFTU_D4
SRPRB
AAA_22
Microp_apicomplexa_10
Motif
Other DBs
NCBI-GeneID:
108216749
NCBI-ProteinID:
XP_017245076
UniProt:
A0AAF1AUW8
LinkDB
All DBs
Position
4:complement(26409959..26412455)
Genome browser
AA seq
449 aa
AA seq
DB search
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETNKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPEKIAFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQINEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGTIKPGMVVTFGPSGLTTEVKSVEMHHESLLEALPGDNVGFNV
KNVSVKDLKRGYVASNSKDDPAKGAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AELLTKIDRRSGKELEKEPKFLKNGDAGMVKMLPTKPMVVETFAEYPPLGRFAVRDMRQT
VAVGVIKAVEKKDPTGAKVTKAAAKKGAK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggaaaaagttcacatcaatattgtggtcattggccatgtcgattctgggaaa
tcaaccaccactggtcacttgatttacaagcttggaggtattgataagcgtgttatcgag
aggtttgagaaggaagccgctgagatgaacaaaaggtcgttcaagtatgcttgggtcctt
gacaagttgaaggccgagcgggagcgtggtattactattgatattgctttgtggaagttc
gaaactaataagtactattgcactgtcattgatgctcctggtcatcgtgactttatcaag
aacatgattaccgggacctcacaggctgattgtgctgtgcttattatcgactccacaact
ggtggttttgaagccggtatttctaaggatgggcagacccgtgagcatgcattgcttgca
ttcacccttggtgtcaagcagatgatttgctgttgtaataagatggatgccaccactcca
aaatactcaaaggcgaggtacgatgaaattgtgaaggaagtctcttcatacttgaagaag
gttggatacaatcctgagaaaattgcttttgttccaatctctggttttgaaggggacaac
atgatagagaggtctaccaaccttgattggtacaagggtccaaccctgctagatgctctt
gaccagatcaacgagcccaagaggccctcagacaagcctcttcgtcttccccttcaggat
gtttacaagattggtggtattggaactgtgcccgtgggacgtgttgagaccggaactatc
aagccaggaatggttgtcacctttggcccatctggtttgaccactgaagtcaagtctgtg
gagatgcaccatgaatctctgcttgaggctctgcctggtgacaacgttggcttcaatgtg
aaaaatgtttctgtcaaggatctcaagcgtggttatgtggcctcgaactccaaagatgat
cctgctaagggagctgccagcttcacatctcaggtcattatcatgaaccaccctggtcag
attggaaacggttatgccccggtacttgattgccacacctctcacattgctgtcaagttt
gctgagctcttgaccaagattgaccgaagatctggcaaggagcttgagaaggagcccaag
ttcttgaaaaatggtgatgctggaatggttaagatgcttcccaccaagcctatggtggtt
gagacatttgctgagtacccgcccctcggtaggttcgctgttcgtgacatgagacagact
gttgcagttggagtcatcaaggctgttgagaagaaggatccaactggcgccaaggtcacc
aaggctgctgccaagaagggtgccaagtga
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