Daucus carota (carrot): 108216905
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Entry
108216905 CDS
T05350
Name
(RefSeq) PHD finger protein MALE MEIOCYTE DEATH 1
KO
K26271
PHD finger protein MS1/MMD1
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcr03000
]
108216905
Transcription factors [BR:
dcr03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
108216905
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GFIT
Motif
Pfam:
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
108216905
NCBI-ProteinID:
XP_063947352
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Position
4:39806644..39809889
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AA seq
684 aa
AA seq
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MTNSKQILESFKKRKRMPKLYDFHTFADPGCPITLTGPFRDNIRHFLQQCAQLEDYSIDG
MPIWCTFLLHESKGLVIPLYTIEETAKNSFQPYCDQCRCTGWSHHFVTKRKYHMIIPVDD
EWTKPLNDGVFHMHTHLLHGLIHCNGFGHLLCINGMEGGSKFLYGKEIMDLWDRICTNLH
TRKITVEDVSVKRGMDLRLLHGIAYGRPWFGRWGYKFCQGSFGVTSEKYERAIELLSSLG
LDQIIQDFCSSKLYSDVKRIICYYRDMSESELITIRDLFHFMLSLKSRGLPARRSPSNAV
LSVCSRSSARKNVQNKNVSKRKNGRCKKFTTLASNLDSRWPMKRMQYVAEVVVNALKEKK
AANGGYNCGMSRQEVRDAARMRIGDTGLIDYMLKSMNNVIVGGYVVCRDVNPQTRVLEYT
IEEACENGAAVQVDPESDLVVLSQDQPQAIMPGIDVYSDIAYLYNNVLLEYQNSEWVELA
VERVIDSKQFVKEWLFIDEPDQLLRFVCRVIPSLSDLETEFTRGYPPGEHIAVPLHLTVG
ELKEVIQHAMRDTYYIMESILVTEVRGLEGVDDGEVLFGIVESGSELCFRAVGMDFGSEL
KYEGGADNWTVKCKCGTRDDDGERMVACDLCEVWQHTRCIGIDDFDTMPPFFVCDSCCAA
LAPPRTIQPSFEYDFNSLGTCLNY
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaccaattcgaagcaaatcttggagagcttcaagaagagaaaaaggatgccaaagctc
tatgatttccacacatttgcagacccgggttgccccattactctcacgggtccttttcga
gataatattcgacattttctgcagcaatgtgctcaacttgaagactacagcattgatggg
atgccaatttggtgcacttttcttcttcacgaaagcaaaggccttgtgattcctctctac
accattgaagaaactgccaagaactcgtttcagccctactgtgatcaatgtcgatgcact
ggttggagtcaccatttcgtgacaaaaagaaagtatcacatgattatcccagttgatgat
gaatggactaagccactgaatgatggcgtttttcatatgcacactcatcttttgcatggg
ttgattcattgcaatggtttcggccatcttctttgtatcaatgggatggaaggtggatct
aagttcttgtatggtaaagagataatggatctttgggacagaatatgcaccaatcttcac
actcgtaaaattacagtggaggatgtgtctgtgaaaagggggatggatcttcggttgctt
catggtatcgcatacggaaggccatggtttggcagatggggatataaattttgccaaggg
agttttggagtaacaagtgaaaagtatgagagggctattgagcttcttagttctcttgga
cttgatcaaatcattcaagacttttgttcttcaaaactctatagtgatgtcaagaggatc
atctgctattacagggacatgagtgaatctgaactgatcacaatcagggatctatttcac
ttcatgctttctctcaagtcccgaggtttgcctgcgagaagatccccctctaatgctgtc
ctatcagtttgttcaagatcctcagcaagaaaaaatgtgcagaataagaatgtcagcaaa
aggaaaaatggaaggtgcaagaaattcactacactggcttccaatttagacagtaggtgg
ccaatgaaaagaatgcagtatgttgctgaagttgttgttaatgcacttaaagaaaagaaa
gcagcaaatggtggatataattgtggaatgagcaggcaagaagtccgggacgctgctcgt
atgcgaattggagatactggcttgatcgattacatgttaaaatcaatgaacaatgtcatt
gttggtgggtacgtcgtatgtcgagatgtgaacccacaaactcgggtgctggaatacact
attgaagaggcttgtgagaatggagctgctgttcaggttgatccagaatcggatttggtt
gtgctttcacaggatcagccacaggctataatgcctggcattgacgtttattcagatatt
gcatacttgtacaacaatgtgcttttggaatatcagaactcagaatgggttgagttggcg
gttgaaagagtcattgatagtaaacagtttgtcaaagagtggcttttcatagacgagcct
gatcagctactgaggtttgtttgtagggtgattcctagtttgagtgatttggaaactgaa
tttacaaggggatatccaccgggagagcacattgcagttcctttgcacttaacagttggc
gagttaaaagaagtgatccagcatgcaatgagggatacttattatatcatggagagtatt
ttggtaactgaagttaggggactggagggagtggatgatggagaagtgttatttggcata
gttgaatcagggtctgaactatgctttagggctgtaggaatggattttggttctgaattg
aagtatgaaggcggggcagataattggactgttaaatgcaaatgtggaacaagggatgat
gatggggagaggatggtggcttgtgatctttgtgaggtctggcagcacactcgctgcatt
ggcattgacgattttgataccatgccgccattctttgtgtgtgacagctgttgtgctgcc
cttgctcctccaagaaccatccagccgagctttgaatatgacttcaactctcttgggact
tgtcttaactactga
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