Daucus carota (carrot): 108217183
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Entry
108217183 CDS
T05350
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00040
Pentose and glucuronate interconversions
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108217183
Enzymes [BR:
dcr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
108217183
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
108217183
NCBI-ProteinID:
XP_017245516
UniProt:
A0AAF0WUU7
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Position
4:30076198..30078618
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AA seq
348 aa
AA seq
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MEAFPYADVDSSLRAMAGKAEGFGRSAVGGLHGSLHSVTTLADDGPGSLREACSKTEPLW
IVFDVSGVIHLSSDLSVSSFKTIDGRGSRIKLRGRGLRLHECENVIICNLEFEAGRGRDV
DGIQIRPSSKHIWIDRCSLSDYDEGLIDITRQSTDITVSRCHFKNQDKAMLIGADPSHFE
DRCIRVTIHHCFFDGTRQRQPRVRFGKVHLYNNYTRNWGVYAICAGVESQIFSQCNIYEA
GEKKKVFDYYPEQAADKPEAESGVIRSEGDVFLNGALGTGTHDTIVFHPSEYYSTWTSEA
AASYFLKGILQTCSGYQAMVRPIDDCDLLDSPVDHSNDPDENAFTTTN
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggaggccttcccgtatgcagatgtggattcgagcttgagagccatggctggtaaggct
gagggtttcgggcgatccgctgttggtggactccatggatcattgcattctgtcaccaca
ttggccgatgacggaccaggatcacttcgtgaagcatgtagtaagacagagccactctgg
attgtcttcgatgtctcaggcgtcattcatctttcatctgacctcagtgtttcttcattc
aagacaatagatggtcgaggcagccgtataaagctgaggggcagaggcttaagactccac
gaatgtgaaaacgtaattatatgcaacctggaatttgaagcagggagaggacgtgatgtt
gatggaattcaaatacgaccaagctcaaaacatatatggatagaccgatgtagcttgagt
gactatgatgaaggacttatagatataactagacaaagcacagatataactgtttcaaga
tgccacttcaaaaaccaagacaaggcgatgcttattggagcagacccgtctcattttgaa
gatagatgcatcagagtgacaattcaccactgtttttttgatggtactagacaaagacag
cctcgggttcgatttgggaaagttcatctttataacaactacacaaggaactggggagta
tatgctatttgtgctggtgtagaatcgcagatattctctcaatgcaacatctatgaagca
ggggagaagaaaaaggtttttgactattacccagaacaggcagctgataaacccgaagca
gagtctggtgtgatcaggtctgaaggggacgtgttcttaaacggtgcactaggaacagga
acgcatgatacaatcgtgttccatcctagtgaatattattcgacttggacttctgaagct
gctgcatcatattttcttaagggcatcctgcaaacttgttcaggctaccaagcgatggtc
cggccaatagatgattgtgatctgcttgatagtccggttgatcactctaatgatccggac
gagaatgcgttcacaacaacaaactaa
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