KEGG   Daucus carota (carrot): 108217502
Entry
108217502         CDS       T05350                                 
Name
(RefSeq) UBP1-associated protein 2B
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108217502
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dcr03019]
    108217502
   03041 Spliceosome [BR:dcr03041]
    108217502
Messenger RNA biogenesis [BR:dcr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     108217502
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108217502
Spliceosome [BR:dcr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    108217502
SSDB
Motif
Pfam: RRM_1 RRM_7 Cas_Cas6_C
Other DBs
NCBI-GeneID: 108217502
NCBI-ProteinID: XP_017245822
UniProt: A0A166G271
LinkDB
Position
1:complement(8020206..8048170)
AA seq 393 aa
MTKLKSKNKKPIKTPQQSYPKTLEKIKKHKSKKNQQNSKRPISQNPKKPDPESLQALLEP
YTKHQLISFLIDSALKTPSVHSQIVEKAETDVSHRKLFFHGLGWDTTRQAVVLSFEKYGE
IEDCSLIIDKGTGRAKGFGFVVFKSRDGAKKALEEGKLKIDNRVVWCQLACVGPVGNVGG
LDGFGSRKISVGNVGKDVDSGKLREFFERFGEIEVGPLGFDAGTGKSRGYAIFIFKNLDS
VKKVLEETNKVFEGVMLNCRMADSGRGGKSVSSITTVVQPLSNVVDQNVGLLGQHSVSNR
LLVQQTGYNSFLGGGLFANPGGGLLGPICGQALIGGNQFGQIGGGLGGYGAVMMGQGMDC
LGANQSLLGPYSSSSPVPMFPGLLQAYTETKLG
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgacaaagctgaaatcaaagaacaaaaaacccatcaaaaccccccaacaatcatacccc
aaaaccttagaaaagatcaagaaacacaaatcaaagaaaaaccaacaaaactcaaaaaga
cctatatcccaaaaccctaaaaaaccggacccggaatccctccaagcccttcttgaaccc
tacacaaagcaccagctcatcagctttttgattgattctgccctcaaaactccttcagtt
cactcccagattgtcgagaaagccgaaacagatgtctctcataggaaactattttttcat
gggcttggttgggacaccacgcgccaagccgttgttttgagtttcgaaaagtatggggaa
attgaggactgtagtttgattattgataaggggactgggagagctaaagggtttggtttt
gttgtttttaagtcgagagatggggcgaaaaaggccttggaagaggggaaattgaagatt
gataatcgggttgtgtggtgtcagctggcctgtgttggaccagtggggaatgtggggggt
ttggatggatttggtagtaggaagatttctgttgggaatgtagggaaggatgttgattca
gggaagttacgggagttttttgagaggtttggggagattgaggtggggccgttggggttt
gatgccgggacagggaaaagtagggggtatgcgatctttatttttaagaatttggatagc
gtgaagaaagtgttggaggagactaataaggtgtttgagggggtgatgttgaattgtcga
atggcggatagcgggaggggtgggaagagtgttagttcgattacgactgtagtgcagcct
ttgtcgaatgtggtggatcagaatgtagggttgttagggcagcattcagtatccaatcgc
ttgttggtgcaacagacgggttataattcttttttgggaggagggttgtttgcgaatccg
ggtggaggtttattgggtcctatatgtggacaagcattaattgggggaaatcaatttgga
caaatagggggagggttaggaggctatggcgcggtgatgatgggtcaaggaatggattgt
ttaggtgcgaatcaatctttgttggggccatatagcagttctagtcctgttccgatgttt
ccgggtttgctgcaggcttacacagaaacaaaattagggtag

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