Daucus carota (carrot): 108217903
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Entry
108217903 CDS
T05350
Name
(RefSeq) zinc finger protein MAGPIE
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcr03000
]
108217903
Transcription factors [BR:
dcr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108217903
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2_4
zf-C2H2
zf-C2H2_STOP2_C
zf-C2H2_jaz
zf-met
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
108217903
NCBI-ProteinID:
XP_017246297
UniProt:
A0AAF0X2U7
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All DBs
Position
4:48551897..48554932
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AA seq
462 aa
AA seq
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MLEQMADEAISSSFIQNQIDESNPPPAKKKRNLPGTPDPEAEVIALSPKTLMATNRFLCE
ICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHNHPSRALGDLTGI
KKHYCRKHGEKKWKCEKCAKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAF
CEALAEETARVTAATSSINNSTLPNMNYHFMGSASLGQNTAQHFSSIFEPVISNNHEIFT
DPIRQAGLSLWMGHDSTQSSHTAPMNNNLQPLFSDPKSNYQFNWASTGNNRISIPSPFDE
HQTTSIASSTNALPVVNKDVGNQLVSIPSLYSSQNMTDQCTHSATMSATALLQKAAQIGA
TSTDPSFLESIGLKRSNMNHVQDGSKFFGLFGTNLMTTTNLGISTTADQVNEHLSNLNHH
LYPSKRRHIQQDQDSSGSGETRDFLGVGARSICHTPSINGWI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgttagaacaaatggcagatgaagcgatctccagtagtttcatccaaaaccaaattgat
gaaagcaatcctcctcctgctaagaagaaaagaaatctcccaggcaccccggatccggaa
gccgaagtcatcgccttgtcaccgaagactctcatggcaaccaacagattcttatgtgag
atatgtgggaaggggtttcaaagagatcaaaatttgcagctccacaggcgaggccacaat
ttaccatggaagctgaagcaaaggactagcaaggaagtgcgtaagcgcgtttacgtgtgc
cctgagaagagctgtgtccacaaccatccttcaagggctctcggagacctcactgggatc
aagaaacactattgccgaaagcatggggagaagaagtggaagtgtgagaagtgcgccaag
cgatacgctgtgcagtcagattggaaagcacactcgaaaacctgcggcactagggaatac
aaatgtgattgtggcactatattctccaggcgtgatagcttcatcacccacagagcattt
tgtgaagctctagccgaagaaacggccagagtcacagctgcaacatccagcatcaacaat
tcaacgttgccgaatatgaattatcatttcatgggatccgcttcgctaggccaaaacaca
gcacagcatttcagttctatatttgagccagttatctcaaacaaccatgagatattcact
gatccaatccgacaagctggactttcgttgtggatgggccacgacagcacacaaagtagt
cacaccgcgcccatgaacaataatctccagccattgttcagtgatccgaaatcaaattat
cagttcaattgggctagtactggaaacaataggatcagtatccctagtccttttgacgaa
catcaaacgactagtattgcaagcagtacaaatgcacttccagtagtgaataaggatgtt
ggaaatcaactagtgagcattccttccttgtacagcagccagaacatgacggaccaatgc
acacactctgcaactatgtctgcgacagcattacttcagaaagctgcacagattggtgca
acttccacggatccatcgttcttggaaagcattggattaaagcgtagtaacatgaatcat
gtccaagatgggagcaagttctttggattatttggcacaaatttaatgacaacaaccaat
cttggaattagtaccactgctgatcaggttaatgaacatctctcaaatctgaatcatcat
ctgtatccctcaaagcggcgacacatacaacaggatcaagacagttctggatcaggcgag
acaagagattttctaggtgtgggtgcacgatcaatctgccatacaccttcaattaacgga
tggatttga
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