Daucus carota (carrot): 108217918
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Entry
108217918 CDS
T05350
Name
(RefSeq) protein argonaute 1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108217918
03036 Chromosome and associated proteins [BR:
dcr03036
]
108217918
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108217918
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108217918
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
108217918
microRNA pathway
RISC loading complex
108217918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
Gly-rich_Ago1
ArgoL2
ArgoMid
AcaB
Motif
Other DBs
NCBI-GeneID:
108217918
NCBI-ProteinID:
XP_017246318
UniProt:
A0AAF1AY93
LinkDB
All DBs
Position
4:complement(34811468..34819117)
Genome browser
AA seq
1101 aa
AA seq
DB search
MVRKRRTDQAGGGESSEPQDSNAGQGAPQRPPQQQGRGAPQVYPQQQQGPGGRGFPQQQQ
VPGGRGFAPQQQGPGGRGFAPQQGGYQGRGGYEGGRGGPRGGMASQQYTGESPYQQQGRG
AQQQQPRGPLPQHRGGGVAGGGRGGFVPSAGARPSVPELHQASQAPPQAGVSTYPMPRAI
TAEVTQSEGSSSVSAVEASSSQVTQQLQHISLKSESSSIEAAQPNPVSSKALRFPLRPGR
GSTGSRIVVKANHFFAELPDKDLHQYDVTISPEVSSRGVNRAVMEQLVKLYRESHLGKRL
PAYDGRKSLYTAGPLPFVNKEFKIVLTDEDDGSGGARRERDFKVVIKLASRADLHHLEMF
LKGSQADAPQEALQVLDIVLRELPTARYSPVGRSFYSPDIGRRQPLGEGLESWRGFYQSI
RPTQMGLSLNIDMSSTAFIEPLPVIEFASQLLNRDVSSRPLSDADRVKIKKALRGVKVEV
LHRGTMRRKYRISGLTSQATRELTFPVDERGTMKAVVEYFRETYDVILKQTQLPCLQVGN
QQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPSDREADILRTVQHNAYADDP
YAKEFGIKISDKLASVEARILSPPWLKYHETGRETRCLPQVGQWNMMNKKMVDGGIVNNW
MCVNFARNVQDNLASGFCSELAQMCTISGMRFNPNPVLPVTGARTDQVERVLKSRFQEVQ
KLKKELDLLIVILPDNNGSLYGDLKRICETDLGIVSQCCLTKHVFKMSKQYLANVALKIN
VKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITK
YAGLVCAQAHRQELIQDLYKSWQDPNRGTVSGGMIKELLISFRRSTGQKPQRIIFYRDGV
SEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHRDRNSVDRSGN
ILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFSADGLQSLTNNLCYT
YARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSESMASGAAGGRGGMGVGRSTRAANA
NAAVRPLPALKENVKRVMFYC
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggtaagaaagaggagaactgaccaggctggtgggggagagagctcggagcctcaggat
tctaatgctggacagggtgcacctcaacgccctccacagcagcaaggacgaggtgcacct
caagtctatccacaacagcagcaaggaccgggaggtagaggctttccccaacagcagcag
gttcctggaggtagaggcttcgccccacagcagcagggtccaggtggtagaggctttgcc
ccacaacagggaggataccaaggacgtggaggatatgaaggtggacgcggtggcccgcga
ggtggtatggcttctcagcagtatactggtgaatctccttatcagcagcaaggcaggggt
gcccaacagcagcaaccacgtggaccattgccccaacaccgtggcggtggcgtagctggt
ggtggtcgtggaggatttgtaccttctgctggtgctaggccatcagtccccgagctgcac
caagcttcccaggctccacctcaagcaggggtatcgacttatcccatgcctcgtgctata
acggctgaagtgacacagtcagaaggtagctcttctgttagtgcagttgaagcatcatct
tcgcaagtgacacagcagcttcagcatatttctctgaaatctgaatcctcttctatcgag
gctgctcagcctaatcctgtttctagcaaggcacttagatttccactccgtccgggcagg
ggcagcactggttctcgtatcgttgtaaaggccaaccatttctttgcagagttgcctgat
aaggatttgcatcagtatgatgtaacaatctcccctgaagtcagttctcgtggtgtcaat
cgtgctgtgatggaacagcttgtcaaactgtatagagaatctcatcttgggaagcgtctc
cctgcgtatgatggtagaaagagtttgtatacagcagggcctcttccttttgtcaacaag
gagtttaaaattgtcctgaccgatgaggatgatggatctggtggtgccagaagagaaagg
gacttcaaagttgttatcaaactagcttctcgagctgaccttcaccacctagaaatgttt
ttaaagggcagtcaggctgacgcacctcaagaagctttgcaggtgttggacattgttttg
agggaattgcctactgccaggtattcccctgtggggcgttcattttattcacctgatatt
ggacgaaggcagccactgggtgaaggcttggaaagctggagaggcttttatcaaagtata
cgccctacacagatgggcttgtcactcaatattgatatgtcctcgactgcatttattgag
cctctacctgttatcgagtttgcttcacagctgttgaatagggacgtttcgtccaggcca
ctgtcagatgctgatcgtgtgaagatcaaaaaggccttgaggggagtgaaggttgaggtt
ttgcaccgtggaacaatgcgcaggaagtatcgtatttctggtttaacatcacaggcgacc
agggagctcacgtttccagttgatgaaagaggtacaatgaaggccgtggttgagtatttc
cgcgagacttatgatgttatcctaaagcaaactcaattaccttgcttgcaagttggtaac
cagcagaggccaaattatctgcccatggaggtttgcaaaattgtggaggggcagaggtac
tcaaaaaggttgaatgaaaggcagatcactgcgttgcttaaagttacttgccaacgtcct
agtgacagggaggctgacattcttcgaaccgttcagcataatgcatacgctgatgatccc
tatgctaaggagtttggaatcaaaattagtgacaaactagcctctgtagaagcaagaatt
ctctctccaccatggctaaaataccatgagactggacgtgagacacgatgtctaccccaa
gttggtcagtggaatatgatgaacaagaaaatggttgatggaggaattgttaataattgg
atgtgtgtgaactttgcacgaaatgttcaagacaatttggctagcggcttttgttcagaa
ctcgcacagatgtgcactatatcgggaatgcggttcaatcccaatccggtgcttccagtt
accggcgcgcgcactgatcaggtggagagagtgttaaaatcacgttttcaagaggtgcag
aaactgaagaaggagcttgacctgttaattgttatccttccagataataatggctcacta
tatggcgatttgaagagaatctgtgagactgaccttggaatagtttcacagtgttgcttg
acaaaacatgtcttcaagatgagcaagcaatacctggcaaatgtggctttaaagattaac
gtcaaagtcgggggaagaaatacagttcttgttgatgctttatcgaggcgtattccactt
gtcagtgaccgccctacaatcatttttggtgctgacgtcacccatcctcatcctggagaa
gattccagcccctcgattgcagcagtggttgcttcacaagattggccagagataacaaag
tatgcgggattggtttgtgctcaagcccacagacaagagcttattcaggatctgtacaag
agctggcaggatccaaacagaggaactgtatcaggcggcatgatcaaggaactccttatt
tcattccgcagatcaactggacagaaaccccagcgcattatattctatagggatggtgtt
agtgaggggcagttctatcaagttcttctgtatgaacttgatgcaattcgcaaggcttgt
gcttcattagagccaaactatcagcctccggttacatttgttgtggttcagaaacgccat
cacactaggttgtttgccaacaatcatcgcgaccgtaattcagttgataggagtggaaat
attttgcccgggactgttgtggattccaaaatctgtcacccaacggagtttgacttttac
ctttgcagccatgctggcatccaaggaactagccgaccagcacattaccatgttctttgg
gatgagaacaagttctcggcagatggactacagtccctcactaacaatctatgttacact
tatgccaggtgcacaagatctgtctcaatagttcctccagcatattatgctcacttggca
gcatttcgagctcgcttctatatggaacctgaaacatctgatagtgagtcaatggcaagt
ggtgctgctggtggtcgtggaggaatgggggttggaagaagcaccagggcagcaaatgct
aatgcagctgtgaggcccttgcccgctcttaaagaaaatgtgaagagggttatgttttat
tgctag
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integrated database retrieval system
