Daucus carota (carrot): 108218468
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Entry
108218468 CDS
T05350
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00900
Terpenoid backbone biosynthesis
dcr01100
Metabolic pathways
dcr01110
Biosynthesis of secondary metabolites
Module
dcr_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
108218468
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dcr01006
]
108218468
Enzymes [BR:
dcr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
108218468
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
108218468
2.5.1.29 geranylgeranyl diphosphate synthase
108218468
Prenyltransferases [BR:
dcr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
108218468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
108218468
NCBI-ProteinID:
XP_017246904
UniProt:
A0A165ZD02
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All DBs
Position
4:50782398..50783936
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AA seq
356 aa
AA seq
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MKSLNVFNPWLQTTSISTHSNSFITTFYKQLRPTCPNLKSARPISSVLANQQTQQTQTQT
GSFNFKSYMIEKAVSVNTALNDAVLVQEPPMIHEAMRYSLLAGGKRVRPMLCIAACELVG
GRESFAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDSLLAF
AFYHIATSTKGVSPRRIIQAVGELAKAIGTQGLVAGQVVDILLTGDSSVGLDQLEFIHIH
KTAALLEASVVLGAILGGGEEEEVEKLRKFARCVGLLFQVVDDILDVTKSSQQLGKTAGK
DLMVDKSTYPKLMGLEKSREFAQKLNREAKDQLLGFDEAKAAPLLALADYIAYREN
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctttgaacgtcttcaatccatggcttcaaaccacctctatctccactcactcc
aactctttcattacaaccttttacaaacaactcagacccacttgccccaatctcaaatca
gcccgacccatctcctctgttctcgctaatcaacaaacccaacagacccagacccaaacg
gggtcgtttaatttcaaatcttacatgatcgagaaagctgtatcggttaatactgccctc
aacgacgccgttttggtgcaagagccaccgatgatacacgaggcgatgcggtactcactc
ctcgccggcggcaagcgtgtccggccaatgttatgcatcgccgcctgcgagctcgtcggc
gggcgcgagtcgttcgccatgcctgctgcttgcgccgtcgaaatgatacacaccatgtct
ctaatacacgatgacttgccttgtatggataacgacgatctccggcgcggaaagcccacg
aaccacaaggtctacggcgaggacgtggcggtcctcgccggagattcgttactagccttc
gcattctaccacatagccacctcgaccaagggggtgagtccccgcagaatcatacaagcc
gttggggagctggccaaggctattgggacacaagggctcgtcgctggccaagtcgtggat
atcttattaaccggcgattcatcggtcggattggatcagcttgaattcatacacattcat
aagacggcggcattgctggaggcatcggtggttctgggagccattttggggggtggggag
gaagaggaagtggagaaactgagaaagtttgcgaggtgtgtgggactgttgtttcaagtg
gtggatgatattcttgatgtgaccaagtcgtctcaacaactggggaaaacggcggggaag
gatttgatggtggataaatcaacgtatcccaagctcatggggttggagaaatccagagag
tttgctcaaaagttgaacagagaagctaaggatcagcttctggggtttgatgaggccaag
gcagctcctctacttgcattggctgattacattgcttatagggaaaattag
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