KEGG   Daucus carota (carrot): 108218474
Entry
108218474         CDS       T05350                                 
Name
(RefSeq) lysine-specific demethylase JMJ25
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
dcr  Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dcr03036]
    108218474
Enzymes [BR:dcr01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     108218474
Chromosome and associated proteins [BR:dcr03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108218474
SSDB
Motif
Pfam: JmjC Cupin_2 JmjC_2 FRG2 Cupin_8
Other DBs
NCBI-GeneID: 108218474
NCBI-ProteinID: XP_017246916
LinkDB
Position
4:complement(40587162..40602459)
AA seq 965 aa
MGSKEGENGGGVLEKGGDLMEGEEVVVENCEGKGGRIEGDGDGDQTIEKGQEEKELTKRS
VEEKKVNLEESVPRRNLRQRKLVIKDQYDEFVEKYFQEEDEVKPKKRRRKSSMKTNDEEN
CKMTRGPKKKESDRGNDESASLEGDATSTACKGADALKKAKGGGKTDENGEPLSNMCHQC
QRNDKGRTVKCENCIWKRYCVPCMTTWYPKMTEYDFAKMCPVCQVNCNCKSCLRLEVPKK
DKEKFNLKFTEEEKIEYSKYIIPMLLPFLKQFNEEQMKEKAIEAKIQGLSLSDLKVQKAN
CSLGERIYCDYCKTSIADFHRSCTSCAYDLCLTCCREFRDGCLKVSNEELDFQFVDPGSK
YMHGEGESKPTMRTPDETNREDFLKWKSHEDGNIPCPHKTLGGCGEGILELKCLHKDSVS
TLLVEAEKLSEKYQLVPATTGERCPCFNSASEIGTEKSKLLKAASRKDSSDNYLYSPTAV
ELESKDLSHFQYHWLKGEPVIVNNVLELTCGLSWEPMVMWRAFRQIKNLNHSQLLDVVAI
NCLDWCEVDVNAHHFFKGYREGQLDDAGWPLILKLKDWPPSSSFDEHLPRHGAEFLSSLP
FKEYTNSRSGYLNLAVKLPEKSLKPDMGPKTYIAYGIAEELGRGDSVTKLHCDMSDAVNV
LTHVQEVQFTSAQQVMIEEIKQKHISQDKRELFGEEQIAVDMEKQEEELNEMTGAPNGTI
QSSEVKLGQGSTDITNVQMKRNAAINRTLVSQDVRDKKSELDEYSGNSSVGILDNKIEGI
EHPEGGALWDIFRREDSSKLEEYLRKYFKEFRHVYCLPLDQVIHPIHDQTFYLTMEHKRR
LKQEYDVEPWTFVQKQGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENVHECIRLAEEIR
TLPPNHRAKEDKLEVKKISFYAMQAAVEDLNKLEKEGTKKPDDANASENLAPKGKKGKAE
KKIRL
NT seq 2898 nt   +upstreamnt  +downstreamnt
atggggagcaaggaaggagagaatggaggtggggtattggaaaaagggggtgatttgatg
gagggagaggaggtggtggttgagaattgtgaggggaaaggagggagaattgaaggggat
ggtgatggtgaccagactattgaaaaaggacaggaggagaaggagttaactaaaagaagc
gttgaggaaaagaaagtgaatttagaagagagtgtgccgaggagaaatcttaggcagaga
aaactggttattaaggaccagtatgatgaatttgtcgaaaagtatttccaggaggaagat
gaagttaagccaaagaagagacgcagaaaaagttcaatgaaaacaaatgatgaggagaat
tgtaagatgactaggggtccgaaaaagaaggaaagtgatagaggtaatgatgagtcagct
agtttagaaggagatgctactagtacagcttgcaagggtgctgatgctcttaaaaaggca
aagggtggtggaaagacggacgaaaatggggaaccgctatccaacatgtgtcatcagtgc
cagaggaacgacaaaggtcggactgtaaaatgcgagaattgtatatggaagcgttactgt
gttccctgcatgacgacttggtacccaaagatgacagagtatgattttgccaagatgtgc
cctgtttgtcaagtaaactgtaactgtaaaagttgtttgcggctagaagtgcctaaaaaa
gacaaggaaaaatttaatttgaaattcactgaagaagaaaaaattgaatactctaaatat
attattcccatgcttcttccattcctgaaacaattcaatgaggaacaaatgaaggagaag
gccatagaagctaaaattcaagggttatcattgtcagatttgaaggttcaaaaggcaaat
tgcagtttgggagaacgtatatattgcgactattgtaaaacttcaattgctgattttcac
agaagctgtacaagttgtgcttatgatctttgtctgacttgctgtcgagagttccgtgat
ggttgcctaaaagtctctaatgaagagttggattttcaatttgtggacccagggtccaaa
tacatgcatggtgaaggtgaatcaaagcctacaatgcgcacaccagatgaaactaatcgc
gaggattttttgaagtggaaatctcatgaagatggtaacatcccttgtccccacaaaact
ttgggcggttgcggggaagggatattagagttgaagtgtttacataaagattcagtttcc
acattgctggttgaagctgagaaattgtcagagaaataccaacttgttccagcaactact
ggagagcggtgcccctgtttcaattcagcttctgaaattggcactgaaaaatcgaagtta
ctgaaagcggcatctcggaaagatagcagtgacaattatttgtacagtccaactgctgta
gaacttgagtctaaagacttgagtcattttcagtaccactggctcaagggcgaacctgtt
attgtcaataatgtgctcgagttaacatgtggtttaagttgggaacctatggtcatgtgg
cgtgcattccgtcagatcaaaaacttaaatcattcacagcttttggatgttgttgccatt
aattgtttagactggtgcgaggtagatgttaatgcccaccattttttcaagggttatcgg
gaaggtcagcttgatgatgctgggtggcctcttatcttgaagttgaaagactggcctcct
tccagttcattcgatgaacacttgccgcgtcatggtgctgagttcctcagtagcttgcca
tttaaagaatatacaaattcccggagcggctatctaaatcttgctgtcaagctgccggaa
aagtccttgaaaccggatatggggcctaaaacatatatcgcttatggaatcgctgaggag
cttggtcgtggtgattctgtgacgaagcttcattgtgacatgtctgatgcggtcaatgtg
cttacccatgtccaagaagtacagtttacatctgcccaacaggtcatgatagaggagatt
aaacaaaagcacatttcccaggataaaagggaactttttggagaagaacagatagcagtt
gatatggaaaagcaggaagaggaacttaatgaaatgacaggtgcaccaaatgggacaatt
caaagttctgaggtgaaattgggccagggatctactgatatcactaatgttcaaatgaag
agaaatgcagctatcaaccggacgcttgtgagtcaagatgtccgtgacaagaaaagtgaa
ctggatgaatattcagggaatagtagtgttggaattttggataacaaaattgagggaatt
gaacacccagagggaggtgcactctgggacatatttagaagggaagattcttccaaactg
gaagaatatctaaggaagtatttcaaagaattcagacatgtatactgcctgcctctagat
caggtaattcatcctattcatgaccagacgttttacttaaccatggagcacaagcgaagg
ctcaaacaagaatatgatgtagagccatggacatttgtccaaaaacaaggagatgcagta
tttatacctgctggatgtccgcaccaggttcgaaacttgaagtcatgtataaaggttgca
ctagactttgtttcgccggagaatgtacatgaatgcatccggttagcagaggaaattcgc
acccttccgccaaatcacagagccaaggaggacaaactggaagtgaagaaaatatccttt
tatgcgatgcaagcagctgtggaggatttaaataagctggagaaagaaggaacaaaaaaa
ccagatgatgctaatgcctcagaaaatttggcaccaaaaggcaaaaaaggaaaggcggag
aaaaaaataagattgtga

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