Daucus carota (carrot): 108218531
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Entry
108218531 CDS
T05350
Name
(RefSeq) protein SHORT ROOT IN SALT MEDIUM 1 isoform X1
KO
K25827
cell division cycle and apoptosis regulator protein 1
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcr03021
]
108218531
Transcription machinery [BR:
dcr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
108218531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBC1
LAIKA
EF-hand_6
EF-hand_7
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
108218531
NCBI-ProteinID:
XP_017246997
LinkDB
All DBs
Position
4:47451661..47463786
Genome browser
AA seq
1425 aa
AA seq
DB search
MYPSRGTGSNYGQPQPAKPYDSQSAYRHNLAAAYSASAGGGPDESSQLSMASRHSSMLGG
ASSHEAADISGGYRAHLSAASHYGGQYSSVYGSAALSSTQQHSAQSGKGAAPTALESRRG
YSSTISDSPKFVSSDYVSSSIHGYGQKGDQLYVDKLSDYPSIDRRQYGERSSAYIGREQN
ESTGRYGDSLGFTHQHQTDLYDRLDQASVLRHEQMLKVQSLQSNPLDGGSRQADYLVTRG
AGIRHPADDLMSYASRVDADPRNLTALSGSSHGGQQLAPSILGAAPRRNVDDLVYAQSSS
NPGYGVSLPPGRDYATGKGFHGASLESDYTGSLLSRGSLPRIDDRKDERGGYAREVERRD
EERRRDLLREREKERERDKERERERERERERERERQQRRERERREKERNREIKHGSEVKR
ERTPARLSRDRRGSSLSKEARPLRRVSPRHEVVHRRPSPVKEIRREYVCKVYSSSLVEVQ
RDYLSMDKRYPKLYVASEVAKVIVNWPREDMKLSVHTPVSFEHDFIEDESAAEQTLSPPK
SVDKVLLKSEKGITVWNAKMILMSGLSQNALEELSSERRYDDRIPHYCNMLRFALLKKDN
AFMAIGGPWDAIDGGDPSVDDSSLVRTVIRYAKAMTGLDLTSCRRWNRFLEIHYDRIGKD
GLFNHKEVTVLYVPDLSDCLPSLEIWREQWLAQKKEVAERERQLALKKEKRGEKKDGVKD
KNLESVKDPKGDVKSVKRSNELSGDVNANKKEKDENSLIGTSALQVDIVNNKKVQEKDVS
EIEEGKQLEKKVEEENPGQTSGVTKSGKKRIIKKRIVKQKVSNKNSVAENSTAQTDKLVD
EDVGEKNLNSEVAGQLAKTSATPVAAKTLIRKKIAKKIVKKIVQKGNIVQPELIAAKEPE
GSEGSKGKLDSGIATGLQDSSVKTVVKKKIIKRVPKRKASALGTSDGANESAKDVNKDGS
KLATAENVMKTTGEQTTDASNQGKEVESENKALPKVNLKQSEKQAMGSSSKKVSKAVDGK
KVKDHSNISMEAGNGEQTVGQKDGDAGRNEKSNEKEKSKVEKERKDKDGKVETRNKSNRD
VKEKKKPEEPPRHPGLFLRTKGSKNMKLRSLSLSLDSLLDYTTKDIEESTFELSVFAETL
YEMLQYQMGSRLLTFLQKLRIKFITKRNKRKRQRDVSAKKSEQVSPVKRVKTDNPSVEVK
VIETESKDESVKPDTKDKSQSNLAESIKSETNTELQTDVGKIANVEDGNSSINEDIKVKP
DDETDEDEDPEEDPEEDEEMPDGSPHDSANVLQQEKDATNNSATEAVKSDKVPEDEKNKN
QEPAKETSDTKPKLEAERNPEEAKADKRKKESRVVDKELLEAFRFFDRNRVGYIRVEDMR
LIIHNLGKFISHRDVKELVQSALLESNTGRNDQILYDKLVVMSDI
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgtatccgtctcgagggactggcagtaactatggtcagccgcagccagctaaaccctac
gattctcaatccgcttatcgccacaacttggcagcggcctattctgcaagtgcaggtgga
gggccagatgagtcttctcagctatctatggcttcacgccattcatctatgctcgggggt
gctagttcccatgaagcagcagatattagtggaggatatagagctcatctctctgctgca
tcccattatggtgggcagtacagctcagtgtacggttcagctgctttaagcagtacccag
cagcattctgcccaaagtggcaagggggctgcacctactgctttggaaagtcgacgtggt
tatagctcaacgatatcagactcacctaaatttgtatctagtgactatgtctcctcatca
atccatggatatggtcagaaaggtgatcaactatatgtggataagctttctgattatcca
tcaattgacagacgtcagtatggtgagcgatcaagtgcctatattggtagggaacaaaat
gaatcaactggccggtatggagattcacttggttttacgcatcaacatcagacagatttg
tatgatcgcttggaccaggcatcagtgcttcgacatgaacagatgctaaaggttcagtcg
ctgcaatctaatcctcttgatgggggttctagacaagctgattatcttgtgacaaggggt
gctggcattcgtcatccagctgacgatcttatgtcttatgctagtagagtggatgctgat
ccacgcaatctaacagctttaagcggttcatcgcatggtggacaacaacttgctccatcg
attttaggggctgcgccaagaagaaatgtcgatgatcttgtttacgctcaaagctcttca
aatcctggttatggagttagcctgcctcctgggagggactatgctacaggaaaagggttt
cacggtgcttcacttgagtctgattatactggtagcttgttgtcacgtgggagtctacca
agaatagatgaccggaaagatgagagaggtggatatgctcgggaggttgaaagaagagac
gaggaacggcgcagggatctcttgcgtgagcgtgaaaaggaacgagaaagggacaaggaa
agagaacgggaacgtgagcgtgaaagggagcgagaaagagaaaggcaacaaagaagggag
cgtgaacgacgagaaaaagagagaaatcgggagatcaagcatggatctgaagtgaaacgt
gaacgaactcccgcaagactctctagggatcgacgtggttcctcattgtcgaaagaagcg
agacctttacgacgagtttcaccacgtcatgaagtcgtacataggcgcccctcacctgtc
aaagaaatacgaagagaatatgtatgcaaggtctactcctcaagtttggtagaagttcag
agggattatttatcaatggataagcgatatcctaagttatatgtagcttcagaagtcgca
aaggtaattgtgaactggccaagggaggatatgaagctctctgtccatactcctgtcagt
tttgagcatgatttcattgaagatgagagtgctgctgagcaaactttgtcgccaccaaaa
tcggtggacaaagtacttttaaagtcggagaaaggaatcactgtgtggaatgcaaagatg
attttaatgagtgggcttagtcaaaatgctttggaagagctctcatcagaaagaagatat
gatgataggataccccattattgtaacatgctgagatttgcccttctcaaaaaggataat
gcttttatggcaattggaggcccatgggatgcaattgatggtggtgatccatctgtggat
gactcttcactagttcgaactgttataagatatgccaaggctatgactggactggacttg
actagttgccgtcggtggaatcgttttcttgagatacactatgatagaattgggaaggac
ggcttgttcaaccataaggaggttacagtgttatatgtcccagatttatcagattgcctg
ccttccttggagatatggagggaacagtggcttgctcagaagaaagaagttgctgagaga
gaacgtcagcttgctttgaaaaaagagaaacgaggggagaagaaagatggtgtgaaagat
aagaaccttgaatccgtcaaagatcctaaaggtgacgtgaaatcagtgaagaggtcgaac
gaattgtctggagacgtaaatgcaaacaaaaaagagaaagatgagaacagcttgattggg
acttcagctctgcaagtggatattgtaaacaataagaaagtccaggaaaaggatgtatct
gaaattgaggaaggaaaacaattggagaaaaaggtagaggaagaaaatcctggtcagaca
agtggtgtcacaaaatcaggtaaaaagaggattatcaagaagagaattgtcaaacaaaaa
gtctccaataagaactcagttgcggagaactctacagcacagactgataagttggtggac
gaggatgttggagaaaagaatttaaactcagaagttgcgggtcagttggccaagacatct
gctactccagttgctgcaaagactctaattagaaagaaaattgccaagaagattgttaaa
aaaattgttcagaaaggaaatatagtgcagcctgaactaatagctgctaaggaacctgag
gggtctgaaggatctaaggggaaattagactcaggcattgctaccgggttgcaagattca
agtgtgaaaacagttgtaaagaaaaaaataattaagagagtgcctaaacgcaaggcctct
gctttgggaaccagtgacggtgctaatgagagtgctaaagatgttaacaaggatggatct
aagttggctacggcggaaaatgtcatgaagactacaggagagcaaactacagacgctagc
aaccaagggaaggaagtcgagtcagaaaataaagcgctacctaaagtgaatttgaaacaa
tcggagaagcaagctatgggtagttcaagtaaaaaggtgagcaaggctgtagacggcaag
aaggtgaaagatcacagcaatatctccatggaggcaggcaatggtgagcaaacagtcggt
cagaaagatggtgatgcaggcaggaatgagaagtcaaatgaaaaagaaaaatctaaagtt
gaaaaagaaagaaaagacaaagatggaaaagttgaaactaggaataaatcaaatagagat
gtaaaagaaaagaaaaagcccgaagagcctcctcggcaccctggattgtttctacgcacg
aaagggagcaagaacatgaaactgcgttctttgtcgctttctctcgattcacttttggac
tacacaaccaaagatatcgaggagtcaacatttgagctctctgtctttgctgagaccctg
tacgaaatgcttcagtaccaaatgggttcccgtcttttgacttttctccagaaattgcgc
attaagtttataaccaaaagaaataaacggaagaggcaaagggacgtatctgccaagaaa
agtgaacaagtatcaccggtaaagcgtgtgaaaactgacaatcctagcgtggaggtcaaa
gttattgaaacagaatcaaaagatgaatctgttaaacccgataccaaggataaatctcaa
tcaaatcttgctgaatcgatcaaatctgaaacaaatactgagttgcaaacagatgttgga
aaaatcgcgaatgtggaggatggtaactcctctattaatgaggatataaaggtaaaacct
gatgacgaaacagatgaggatgaagatccagaggaagatccagaagaagatgaagaaatg
ccagatgggagcccacatgactctgctaatgtgttgcaacaggaaaaggatgcgactaat
aacagtgctaccgaagctgtcaaatctgacaaggtccccgaggatgagaagaacaaaaac
caggaacctgcaaaagaaacatcagatacaaagcccaagctggaagcagagcgcaaccca
gaggaagcaaaggcagataaaaggaaaaaggaatctcgagtggtggataaagaattgctg
gaggcgttcagattttttgaccgaaaccgagtcggatacatcagagtcgaagatatgagg
ttaattatccataatcttggaaagttcatttcacacagagatgtcaaggaacttgtgcaa
agtgcacttttggagagcaacaccggtagaaatgaccaaattctctatgataaattggtg
gtgatgtctgacatttga
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