Daucus carota (carrot): 108218576
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Entry
108218576 CDS
T05350
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108218576
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcr03021
]
108218576
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108218576
Protein phosphatases and associated proteins [BR:
dcr01009
]
HAD phosphatases
Fcp/Scp phosphatases
108218576
Transcription machinery [BR:
dcr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108218576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DUF8156
DSRM_2
Hydrolase
HAD
Motif
Other DBs
NCBI-GeneID:
108218576
NCBI-ProteinID:
XP_017247062
LinkDB
All DBs
Position
4:complement(28051689..28070079)
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AA seq
640 aa
AA seq
DB search
MSQLGLKCKVYYENNCIGELNIVAVEGSNFEFPNNEIRIHCLSPKSNRCSPHSVAHMIAS
SPVLCKLEAEDKYSDLFSLYIDCIRDRQTGVVLLGEEELHLVAMVNKYKNCPCFWCYTVP
SGLYSVCLRMLDLRCLWIVFDLDETLIVGNTMRSFRDKIASLRIKIAKETDPVRKSGMFA
EMALYEEDQRLLKQYIDRDSVVDSGNVYNVQAEVVKICESQDRIVRPVIRLLDRGIVLTR
INPEIRDTSVLARLRPAWEDLRRHLNSKERKRFEVYVCTMAERNYALEMWRLLDPEAQLI
DPKQLSARIVSVNSGHKKSLNRVFQDQKFHRGMAMVIDDRLKVWEDIDQPRVQVVPAFLP
YRAPLAETANGIPVLCVARNVACNVRGCFFKEFDDNLSRRVCRLFYEDEVKNLPLPPDVS
TYMIPEGGWLAKVRGCGSSEPDRQHIHQNSLSHITDGALYVGLSSQLVESKSTEARERYE
TELRNLLEGSHSSGGNENQSYLGSSMYYGGKGKLLPPSMYVERLQEIGKRCCLEVEYKSV
VGINEYLQFSVEVFFGGQKVGTGRGNTKKDAQQKAAEDALQKLAALVIMLLEEQIMAVCK
AGVQTSNSVKERWEICVMSLCFMKDLTAAYLNELQTRGRN
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagttagggctcaaatgtaaggtctattatgagaacaattgtattggagaattg
aatattgttgctgtggaaggctcgaatttcgagttcccgaacaatgagattcgaattcat
tgtctctcgccgaagagtaatcgctgctcgcctcactctgttgcgcatatgatcgcttcg
tctccggttttgtgcaagctcgaggcggaggataagtattcggacttgttttcgctctat
atcgattgtattcgtgatcgtcagacaggagtggtgttattgggagaagaagagctgcat
ttagtggcaatggtaaataagtacaaaaattgtccatgtttttggtgctatacagttccg
tccggtttgtacagtgtttgtcttcgtatgttggatctgagatgtctctggattgtgttt
gatctcgatgaaacgcttattgtgggcaatacgatgaggtcgtttagagataaaattgct
agtttacggattaaaattgctaaagaaactgatccagttcgaaaatcgggaatgtttgct
gaaatggcattgtatgaagaagatcaaaggttactaaagcaatacatcgatcgagattcg
gttgttgacagtggaaatgtttacaacgttcaagcagaggtggttaagatttgcgaaagt
caggatcgtattgttcgtcctgttataagattgctggataggggcatagtcttaactcgc
attaatccagagatacgcgacactagcgtgcttgccaggttgcggcctgcttgggaggac
ttaagaagacacctgaattcaaaagagcggaaaagatttgaagtttatgtgtgtacaatg
gctgaaagaaattatgcattagagatgtggcgattgcttgacccagaagcacaactaatt
gatcctaagcaactatcagcccgtattgtatctgttaactcgggtcataagaagtctttg
aacagggtcttccaagatcaaaagttccatcgagggatggcaatggtcatcgatgatcgt
ttgaaagtttgggaagacatagatcaacctcgagttcaagttgttccagcatttcttccg
tatcgtgctcctctggcagagactgcaaatggcattccagttctctgtgtggcaaggaac
gtcgcatgcaatgttagaggttgtttcttcaaagaatttgacgacaatctatcaagaaga
gtctgtagactattctacgaagatgaagtcaaaaacctgccattaccgcctgatgtcagt
acctacatgattccagagggaggttggttggcaaaagtacgaggatgtggttcatctgaa
cctgatagacagcacattcatcagaattcactcagtcatattacagatggtgctttatat
gtaggattgtcttcacagttggtggaatcaaagagtacagaggcacgtgaaaggtatgaa
acagagctgcggaatcttttagaaggatcccattcatcaggtggtaatgaaaatcagtca
tacttagggagcagtatgtattatggcggaaaaggaaaattgcttccgccttctatgtat
gttgaaaggctgcaagaaatcggaaagagatgttgcttagaggttgaatataagtctgtt
gtaggcatcaatgaatatttacagttttctgttgaggtcttttttggtggtcagaaagtt
ggcactgggagaggtaacactaaaaaggatgctcagcaaaaggctgctgaggatgcactt
caaaaattagctgctcttgtaataatgctgttggaagagcaaatcatggctgtttgcaag
gcaggagtacaaacctcaaattcagttaaagagagatgggagatctgtgtgatgtcactt
tgcttcatgaaggatctaactgctgcatatcttaacgagcttcaaacaagagggagaaac
taa
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