Daucus carota (carrot): 108218621
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Entry
108218621 CDS
T05350
Name
(RefSeq) pumilio homolog 2 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
dcr
Daucus carota (carrot)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NABP
PUF
PUF_NOP9
DUF445
Motif
Other DBs
NCBI-GeneID:
108218621
NCBI-ProteinID:
XP_017247131
LinkDB
All DBs
Position
4:complement(25566112..25576613)
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AA seq
1042 aa
AA seq
DB search
MLSELGTRPMVSGKEGSFGDELEKELGFMLNESRRQDSDDLQKELSMFRSGSAPPTVEGS
LSAVDRLFNHGGGGLPFSEFGLNNNGSGFSSEEELRSDPAYVSYYYSNVNLNPRLPPPLL
SKEDWRFSQRLQGGGTSNVGGIGDRRKVNRIDSGGAAGGGVSLFSKPPGFNKKKQESQSE
SEWGGEGLIGLPSLELGSKQKTFAEIFQDDVARATPGSGHPSRTPSRNALGDNFDSMGSA
EAELAQLRKGLASADNFEMSSKVQNLSAVQRASTPPVSYSYAAALGTSLSRSTTPDPQHI
ARAPSPCLTPIGEGRGTSEKRSKSSNSYNGNSTHIKEPSDLVAGISGMSLSNGGKNADNS
VKSQIEETVADQEKYTFDMPGGQNNMMHHSYINKSEPTHLHGYSEPAELSYSKSTGNSHG
FHNSSLEADMHSNSYQKGSPGSVPNIGGGLLSHYQQVDPTNLQYPNYGPNGFPMNTPVQP
LMSGHLGNVTMPPLFENAAVASAMAVPLMDPRMMGGNFTSESNFNYDALESQNLGRLRNQ
MTNSALQAPFMDPVYRQYLRTAEYAALHNNPAMDMNYTGNPYVDLLQKAYLGSLLSPQKS
QYGASLGGKASASNLHGFYGNPALGIGLSYPGSPLASPLIPNSPVGPGSPIRHGDVNMRF
PLGTRHLAAGGIMGPWHLNSGSVENTFASSLLEEFKSNKARSFELLEITGHVVEFSADQY
GSRFIQQKLETATTEEKTMVYEEIFPHAVTLMTDVFGNYVIQKFFEHGMPSQRRELANKL
IGQVLTLSLQMYGCRVIQKAIEVVDLDQKIEMVAELDGNVMRCVRDQNGNHVIQKCIECI
PEEHIQFIISTFFDQVVTLSTHPYGCRVIQRVLEHCADAKTQSKVMDEILGCVSMLAQDQ
YGNYVIQHVLEHGKPHERSTIIQELAGKIVQMSQQKFASNVVEKCLAFGDPSQRELLVRE
MLGTTDENEPLQAMMKDQFANYVVQKVLETCSDQERELILTRIKIHLNALKKYTYGKHIV
ARVEKLVAAGERRMAAQPQQLA
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgttatctgaattaggtacaaggccgatggtcagtggtaaagaaggatcatttggtgat
gaattagagaaggagctagggtttatgctaaatgaatcgaggcgacaagattctgatgat
ttgcagaaggagttgagtatgtttagaagtgggtcagctccacccactgttgagggttca
ttgagtgcagttgataggttgtttaatcatgggggtgggggtttgcccttttcggaattt
gggttgaataataacggaagcggtttttcatccgaggaagaacttaggtctgatcctgcg
tatgtgtcttattattactcaaatgttaatttaaatcctaggttgccgcctcccttgctt
tctaaggaggattggcggttttcgcagaggctccaaggaggaggaacttcgaatgtggga
gggattggagataggaggaaagtgaatagaattgatagtggaggtgctgctggtggaggg
gtgtcactgttttcaaaaccaccggggtttaacaaaaagaaacaagaaagtcagagtgaa
tcggagtggggtggcgagggactgattggtttgcctagtttggaattagggagcaagcag
aagacctttgctgaaatatttcaggatgacgtagctcgtgcaactcctggttctggccat
ccttctcgtacaccaagtcgtaatgctcttggtgataattttgactctatggggtcggct
gaagctgagctggctcagctgcgtaagggtttagcttctgcagataattttgaaatgagt
tcgaaggttcagaatttgtctgctgtgcaacgtgccagcacaccgcctgtatcatactct
tatgcagctgcactaggtacttcattatcacgaagcacaacccccgaccctcaacacatt
gctagggctcctagcccttgtcttactcccatcggtgaagggagaggcacttcagaaaag
agaagcaaaagttcaaactcttataacggtaactccactcacataaaggagccttcagac
ttggtagcgggtatatctggcatgagtttgtcgaatggtggtaaaaatgcagacaattct
gtgaagtctcagattgaggaaactgttgccgaccaagaaaaatatacttttgacatgcca
ggtggtcagaataatatgatgcatcactcatacataaataaatctgagccaacgcattta
catgggtactctgagccagcagaactttcctactcgaagagcactggaaatagtcatgga
tttcataactcttctctcgaagccgacatgcatagtaattcttaccaaaagggatctcct
ggttctgttcctaatatcggaggtggcttactctctcactatcagcaggttgatccgacc
aatttgcaatatccgaactatggtccaaatgggttcccaatgaatacaccagtgcaaccc
ttgatgtcaggccatcttggtaatgttactatgccgcccttgtttgaaaatgctgctgta
gcatcagccatggctgtcccgttaatggacccaaggatgatgggtggtaatttcacttca
gaatcaaatttcaattacgatgcattagaatcacaaaatcttggtaggctcaggaaccag
atgactaatagtgctcttcaggcaccatttatggatccagtgtaccgtcagtacttgagg
acagctgagtatgctgcacttcataataatcccgctatggatatgaactacacgggtaat
ccatatgtggatttgcttcagaaagcttatcttggatctttgttatcacctcaaaaatca
caatatggtgcctctctcggtggtaaagctagtgcttctaatcttcatggtttctacggc
aatcctgcacttggaattggtttgtcatatcctggaagtccattggcaagtcctcttatt
ccaaactcccctgttggaccgggtagtccaatcaggcatggtgatgttaatatgcgattc
cctcttgggacaagacatcttgctgctgggggtattatgggaccttggcacttaaattct
ggtagcgtagagaatacctttgcttcatccttgttagaagagttcaagagtaataaagct
cgatcttttgaacttttagaaattacaggtcatgttgtagagttcagtgcggatcagtat
ggtagccggttcattcaacaaaaacttgaaactgcaacaacagaagagaaaactatggtt
tatgaagaaatttttccccatgctgtcacattgatgactgatgtttttggcaattacgtg
atccaaaagttctttgagcatggaatgccatcacagagaagagaactggcaaacaagctg
attgggcaagtattgacactaagtcttcaaatgtatggttgccgagtaattcaaaaggca
attgaagtagtagatttggaccagaaaatagaaatggttgcagagcttgatggaaatgtt
atgcgctgtgtacgtgatcaaaatgggaaccatgttatccagaaatgtattgaatgtatt
cctgaagaacatattcaattcattatctcaacattctttgatcaagttgttaccctttct
acacatccatatgggtgtcgtgtgatacagagggtactagagcactgtgccgacgctaaa
acgcaaagtaaggtgatggatgagattctaggatgtgtcagtatgttggcacaagatcag
tatggaaattatgttattcagcatgtactggagcatgggaagccacatgaacgttcaact
ataatccaggaattagctgggaaaatagttcaaatgagccagcagaagtttgcttcgaat
gtagttgagaagtgtttagcttttggtgatcctagtcaacgtgaacttctagtgcgtgag
atgcttggtacaactgatgagaatgagcctcttcaggcaatgatgaaagatcaatttgca
aattatgttgtacaaaaggtgctggaaacatgcagtgaccaggaacgtgagctgattctg
acccgaattaagattcatttaaatgcactcaagaagtacacttatggcaaacatattgtt
gctcgtgtagaaaagcttgttgctgctggagagaggagaatggctgctcaaccccaacag
ttggcatag
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integrated database retrieval system