Daucus carota (carrot): 108218695
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Entry
108218695 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108218695
KO
K13091
RNA-binding protein 23/39
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108218695
Spliceosome [BR:
dcr03041
]
Common components
Common spliceosomal components
General mRNP proteins
108218695
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
108218695
NCBI-ProteinID:
XP_017247253
UniProt:
A0A162AB73
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All DBs
Position
4:38094974..38105569
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AA seq
609 aa
AA seq
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MEFDEYDYLEKSVYEPKDGKSKDDDIMTEKGHRRSRRESRDKDDEREEDGGERKSSRRLR
DGDENGGGERKRERDEDRDSRRIKSSSGHRSGRDGDRHRERREESDRGEKDGDRHRERRE
KESDRGDKDRDSDKRDKDRVSEKRDKDRDSEKREKDRDSEKREKDRDSEKREKDRDSEKR
ERERRKERERSKEKDRSRRSSSRSRIEREEFLKDGEPEMETRRFKNKKEALEAEADPERD
QRTVFAYQMSLKATERDIYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI
ALSGHLLLGQPVMVKPSEAEKNLVQSNASAVGSGGLAGPYGAVERKLYVGNLHFNMTEFQ
LKQIFEAFGPVELVQLPADQETGHCKGFGFVQFLQREHAKAAESLNGKLEIAGRTIKVSS
VADHVGAQDSGAKAADFDDDDGAGLALNAQSRASLMQKLDRSGTATSFAGSLGAPMLFGS
APVQPSIGMPMNGANPAFPAQMTPAALEPIGKPSECLLLKNMFDPTTEDDPEFDQDIKED
VEEECSKYGQVKHIYVDKNSSGYVYMRFENVEGASRAQQAMHRRWFARKMISAIFLQSYE
YDAKFKGAA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgacgagtatgattatttggagaagtcagtgtatgagcccaaagacggaaag
tccaaagacgatgacattatgaccgagaaaggtcacaggagaagtagaagagagtcaaga
gacaaagatgatgaacgtgaagaagatggaggtgagcggaagagtagtaggagactgagg
gatggagacgaaaatggtggaggggagagaaaaagagagagggatgaagatagggatagt
aggagaattaagtcatcgtcagggcatagaagtgggagagatggagatcggcatagagag
aggagagaggagagtgataggggtgagaaggatggggatcggcatagggagaggagagag
aaggagagtgatagaggagataaggatcgtgattcagataagagggataaggatcgggtt
tcagagaagagggacaaggatcgggattcagagaagagagagaaggatcgggattcagag
aaaagagaaaaggatcgggattcagagaagagagagaaggatagagattctgagaagaga
gaaagagaaagaaggaaagaaagagaaaggtcaaaggaaaaagataggtctagaagaagc
agtagccggtcgagaattgagcgcgaggaatttctgaaagatggagagccggaaatggaa
accaggagatttaaaaataagaaagaagcactagaggctgaagctgacccagaaagagac
cagagaactgtttttgcataccagatgtctcttaaggcaactgagagggatatttatgag
ttcttctccaaggctggaaaggtgagagatgttcgactaatcatggatcgcaattcaaga
aggtcaaaaggagttgggtatatcgagttttatgatgctatgtcagtgccaatggctata
gcattatctggccacctacttcttgggcagcctgtaatggttaaaccttcagaggcagag
aagaatcttgttcagtctaatgcttcagctgttgggtctggtggtcttgcagggccttat
ggtgctgttgagagaaaattatatgttggcaatttacactttaacatgacagaatttcag
cttaaacagatttttgaagcttttggcccagtggagcttgtgcaactacctgctgaccaa
gagacaggacactgcaaaggtttcggctttgttcaatttctgcaacgtgaacatgcaaaa
gcagctgagagtttgaatgggaaattggagattgctggtcgtactatcaaggtttcatct
gttgcagatcatgttggtgcacaagattcaggagcgaaagccgcagacttcgatgatgat
gacggggctggtttggctttaaatgctcaatcgagagcgtcgctaatgcagaaactggac
cgcagtggtactgccacaagttttgcagggtctcttggagctcccatgctttttggctca
gctccagttcagccgtctattggcatgcctatgaatggagcaaatccagcttttccagca
caaatgactcctgcagctttagagccaattggaaaaccaagcgagtgcttgctcttaaag
aatatgtttgatccaactactgaggatgatccagaatttgatcaggacataaaggaggat
gtggaggaagagtgttctaaatatggtcaagtgaagcacatttatgtggacaagaacagt
tctggttatgtctatatgcggtttgaaaatgttgaaggagcgtcacgtgctcagcaagca
atgcataggagatggtttgctcgtaaaatgatttcagccatcttcttgcaatcgtacgaa
tatgatgctaaattcaaaggtgcagcttga
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