Daucus carota (carrot): 108218708
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Entry
108218708 CDS
T05350
Name
(RefSeq) eukaryotic translation initiation factor
KO
K03260
translation initiation factor 4G
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108218708
03012 Translation factors [BR:
dcr03012
]
108218708
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108218708
mRNA cycle factors
Stress granule specific factors
108218708
Translation factors [BR:
dcr03012
]
Eukaryotic type
Initiation factors
eIF-4
108218708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
108218708
NCBI-ProteinID:
XP_017247271
UniProt:
A0A165X0X6
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Position
4:complement(33837246..33845355)
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AA seq
757 aa
AA seq
DB search
MQQGDQTVLSLRPGGGGARAGGATRFAAADLPFLRPQAPSSSSKIGEARFEDRELIRFSR
DQLLQLREAGKINDDILRVKQEVEAEFFGEDQNWNRVENSPQKQPNQPTIRHAEPDSRDW
RSRPEQLPIPVEERFRQDQLNSHHGRGPFSSQQGGGPTPVLVKAELPWSVQRGKLSEKER
VLKTVKGILNKLTPEKFEILKGQLINSGITTADILKGVISLIFDKAVLEPTFCPMYAELC
SDLNENLPPFPADEPGGREITLKRILLNNCQEAFEGADKLREEIRQMTAPEQESERRDKE
KMIKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPDKSCPEEENVEAICQFFRTIGK
QLDESQKARRINDVYFVRLKELSTNPQLASRMRFMVRDVLDLRANGWVPRREEVKAKTIT
EIHTEAERTMNLRPGATAAMRNNRVMASNAQGVANSLGGFPINRPGTGGMMPGMPGSRKM
PGMPGIDNDNWEVTRSRSSPRNDPNQLVGRVQPPSVGKSAVVNPRYLPQGGPLSGGASAL
LQGNAVGSVTSVRPANFSPSIEPAPPSPARPVPLASMRPVANQMSSSFSIDALKRKTTSL
LEEYFSVRMLDEALHCVEELKSPDYHPEFVKEAIALGLEKSPPCLGPVAKLLEYLYAKRV
LTSADIETGCLLYGSTLDDVGIDLPKAPNNFGEIIGILILGGELNVKVLEAVLKKMEDDM
FQKAVFSAALRTVTLSPAGKALLDSNAADIESCKSLF
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaaggcgatcagactgttttgagcttgagacctggtggtggcggtgcaagagct
ggtggagccactagatttgctgctgctgatctgccgtttcttcgccctcaagctccctct
tcttcatccaagattggcgaggctcgatttgaggaccgtgagctgattcggttttctcga
gatcagttgttgcagctcagggaggctgggaagataaacgatgacatcctaagagttaag
caagaagttgaagctgagttttttggtgaagatcagaactggaatcgtgtggagaacagt
ccgcagaaacaaccaaatcagccgactattcgccatgcagagccagacagccgtgattgg
cgcagtcgacctgaacaactgcccatccctgttgaggagagatttcgtcaagaccagctg
aactcacatcatggaagaggaccattttcttctcaacaagggggaggtccaactccagtt
cttgtgaaggctgagttgccatggtcagttcaaagggggaaactatctgagaaagaacga
gtcttgaaaacagtgaaaggtattttgaacaagctgactccggagaagtttgagattctg
aaaggtcaacttattaattctgggataacaactgcagacattttgaagggagttatatca
ttaatatttgacaaggcggtgctggaaccaacattttgccccatgtatgcagagctgtgt
tctgatctgaatgagaaccttcctccattcccagctgatgagcctggtgggagggagatc
accctaaagagaattcttttaaataattgccaggaggcttttgaaggtgctgacaagctc
agggaagaaataaggcagatgactgctcctgagcaagaatctgaaaggagagataaagaa
aaaatgatcaagcttcgcactcttggaaacatccgtctgattggggagcttctaaagcag
aagatggttcctgaaaaaattgtccaccacattgttcaggaacttctaggtccagataag
agctgtcctgaagaggaaaatgttgaggctatatgtcagttctttagaacgattgggaaa
cagcttgatgaaagtcagaaagcaagacgcatcaatgatgtttactttgttcgactcaag
gaactgtcgacaaaccctcaactggcctcgagaatgagatttatggttcgtgatgttctt
gatctgcgcgccaatggatgggttcccaggcgggaagaggtaaaagccaaaaccatcaca
gagattcatactgaagctgagaggaccatgaacttgcgtcctggtgctactgcagctatg
agaaataatcgagtgatggcatctaatgcgcaaggtgttgctaacagtttaggaggtttt
ccgatcaaccggcctggcactggaggaatgatgcctggaatgccgggaagcagaaagatg
cctgggatgcctggaattgataatgacaactgggaggtaactaggtcaaggtcgtcgcca
agaaatgatccaaatcagctggttgggcgtgttcagccaccatcagttggcaagtcggca
gtggtgaatccaagatacctacctcaaggtgggcctttaagtggtggggcaagtgcctta
ctgcaaggtaatgctgttggttctgtgacttctgtccgtcctgctaatttcagccctagc
atcgaacctgcacctccttcacctgctaggcctgttcctttggcatcgatgcgtccagtt
gccaaccaaatgtccagttccttcagcatcgatgcactcaagagaaaaacaacctctctt
ctggaggaatattttagtgtacgtatgctggatgaagcgttacactgtgtggaggaattg
aagtcccccgattaccaccctgagtttgttaaggaagccattgctctggggttggagaaa
agcccaccatgtttggggcctgttgcgaagctgctggagtacctgtatgctaagagagtt
cttacatcagctgacatagagactggatgccttctctatggttcaaccttggatgatgtt
ggtatcgatttacctaaagcaccgaataattttggggagataattggaatcttaattttg
ggcggggagttgaatgttaaggtgttagaggcggttttgaagaagatggaggatgacatg
tttcagaaagctgtattttcggcagcgctgaggactgtcactttgagtcctgctgggaaa
gctttattagattcaaatgcagctgatattgagtcctgcaagagtcttttctag
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