Daucus carota (carrot): 108218710
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Entry
108218710 CDS
T05350
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108218710
Membrane trafficking [BR:
dcr04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
108218710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
NTS_TR130
TPR_2
TPR_1
bL31_N
Motif
Other DBs
NCBI-GeneID:
108218710
NCBI-ProteinID:
XP_063947398
LinkDB
All DBs
Position
4:48281409..48296132
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AA seq
1253 aa
AA seq
DB search
MANFLAQFQSIKNSCDRIIVAVEDVSDLWPLVKKSFEERLPLKGAVLNNKTRNPVFLQSL
PVEYILTTDARIRSRFPHELSLFWFREPYATVVLVTCEDLDEFKTILKPRLKLIVQNDER
EWFIVFVSRAPPHNDQATKMAKKVYARLEVDFNSKKRERCCKLDLLAPEANFWEDMETKV
LESIRNTLDRRIQFYEDEIRKLSEQRFMPVWNFCNFFILKESLAFMFEMAHLHEDSLREY
DELELCYLETVNMVGKQRDFGGMDRGDDQAALLSPGNKPLTQIVQNDSFRAFEFRQYLFA
CQAKLLFKLNRPYEVASRGYAFIMSFSKELVLHEKVLPFCAREVWMITACLSLIDATASR
YSDVSVAPDTEKEFHRVQGDLYSLCRTKFMRLAYLIGHGPDIERSPANSASLSMLPWPKP
AVWPSIPADASSEVLEKEKTILHATPKMKHFGIQRKALPLEPSLLLREANRRRASLSVGN
ALEMFDGQSFMDGSDSELRRAPAPKVNAVTMSRTNSSLGIFESTIDRPMRLSEIHVAAEH
ALKKTISDPDLWKSLSSLEEFEKKYLQLSKGAADNYHHSWWKRHGVVLDGEIAAVWYKNG
NYDLAAKSYEKVCALYSGEGWQDLLAEVLPNLADCQRILNDQAGYLSSCVRLLSLDKGLF
LPKERQAFQSEVILLAHSEMENPVPLDVSSLITFSSNPGPPMEICDGDPGTLCVTVWSGF
PDDINLEALSLTLTDTHNADEGVKARKSSGATILKPGKNAITLSLPPQKPGSYVLGVLTG
HIGHLIFRSHNFSRGGPAESDDLMSYEKPTRPILKVLEPRPLVDLVPAVSSALLLNEFQW
MGIIVKPINYSLKGAILHIDPGPGLVIEETHNIEMERYDNAGENQLKSTRSEDSAGDVHF
KQLTLQNSRLELPEWASNITSVLWIPMRAISDELVRATSEGVDNLQRQSLVDGLRTIALK
LDFGVSLNQTFERHIAVHFTEPFHVSTRVSDKCNDGTLLLQVILHSQVKATYTIYDAWMD
LQDGFAHTGQRDGRPASAFFPLVISPTSKAGILFSICLSNMNPEDEPKQPQEDSILNIKY
EISGNRNVGAHSPVALPHSGVENATEHLTFRCAVGLQRPVLDPCLAVGFLPLPSSGLRVG
QLVAMKWRVERLKFFEDSALSENKQNEVLYEVSANSENWMIAGRKRGYADLSKDEGSRIV
VSVLCVPLVAGYVRPPQLGLPDVSKTTISCNPPGPHLVCVLPPPLSSSFCIPA
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggccaattttttggctcaatttcaatccatcaaaaactcctgcgatcgcatcatcgtt
gccgttgaagatgtaagcgatttgtggcctcttgttaagaagagctttgaagaaaggttg
ccattaaaaggagctgttttgaataacaagacacgcaatcctgttttcctccagagcctg
ccagtggaatatatattgacaacagatgcaagaatacgtagtcgatttcctcatgaatta
tcattattttggtttagagaaccatatgcaaccgtggttctggttacatgtgaggacctt
gatgagttcaagacaatacttaaaccacgcttgaaattaatagttcagaatgatgagcgt
gagtggtttattgtattcgtatccagagcccctcctcacaatgatcaggcaacaaagatg
gcaaaaaaagtttatgcccgacttgaagttgatttcaactcgaagaaaagggaaaggtgc
tgcaaattagatctgcttgcgccagaagcaaatttctgggaagacatggaaaccaaagtc
ctggagtccattagaaacactctagataggcggattcaattttatgaagacgagatccgc
aagcttagcgaacaacggtttatgccagtatggaacttctgcaatttttttattctaaag
gaaagtctggcttttatgtttgagatggctcatctgcatgaagactcattacgcgaatat
gacgagctagaactctgctacttggaaacagttaatatggtagggaaacaaagagacttt
ggaggaatggaccgtggagatgatcaggctgcgctcttaagtccaggcaacaagcctttg
acacagattgttcaaaatgattcatttagagcgtttgagttcaggcagtatttatttgcc
tgtcaagcaaagctcttattcaaactaaatcgtccctatgaagttgcatcaaggggttat
gcatttataatgagcttctcaaaggaactggtcctgcatgagaaagtattaccattttgt
gcacgtgaagtatggatgataacagcttgcttgagtttaattgacgccactgcatcacgc
tatagtgatgtatcagttgcacctgatacagaaaaagagtttcaccgtgttcagggagat
ttgtattccctatgccggactaagtttatgaggcttgcatatttaattggtcacggacct
gatattgaaagaagtcctgccaacagtgcgtcactcagcatgctaccttggccaaagcca
gcggtttggccttcaattccagctgatgcttcatctgaagtgcttgagaaggaaaagacg
attcttcacgcaactccaaagatgaaacattttggaattcaaagaaaagcactacctctc
gaaccctcactactactgcgtgaagccaatcgtaggagggcttccctttctgttggaaat
gctttggaaatgtttgatgggcaatcttttatggatggctcagattcagaactaagacgg
gctccagcacctaaagtaaatgcagttacaatgtcacgaactaattcttctcttggaatc
tttgaaagcacaatcgaccgaccaatgagactttctgaaattcacgttgctgcagagcat
gctttgaagaaaacaatatcagaccctgatttatggaaatctctgtcatctttggaggag
tttgagaaaaagtatctacagctatctaaaggtgctgctgataattatcatcactcatgg
tggaaacggcatggagttgtacttgatggagagattgcagctgtctggtataagaatggt
aattatgatctagccgccaagtcgtatgagaaagtctgtgctctttattccggggaagga
tggcaagatctgttagcagaagtccttcccaatttagcggactgtcagagaatactcaat
gatcaagctggatacctatcatcttgcgtcagattgctgtcactagacaaaggcttgttc
ttgcccaaagaacgacaagcttttcaatcagaagttattcttcttgcacacagtgaaatg
gagaaccctgtacccctagacgtgtcatccttaataacattttctagcaatcctgggcca
ccaatggaaatatgtgatggggatcctggaaccttgtgtgttactgtatggagtggtttt
ccagatgatataaatcttgaagcactcagtctaactctcacggatacccataatgctgat
gaaggtgttaaggcaagaaagagttctggtgcaaccattttaaagcctggcaagaatgcc
atcaccctttccttacctccacagaagcctggttcttatgttttgggcgttcttacaggt
catattggccacttaatatttagatctcataatttctccagaggtggacctgcagaaagt
gatgatcttatgagttatgagaagccaacaagacctatcttgaaggtcctcgaaccaagg
cctttggttgaccttgttcctgctgtttcttctgctttgctattaaatgaatttcagtgg
atgggaataattgtaaaacctatcaattactccctcaagggtgctattttgcacattgac
cctggtcctggtctggtaatagaggagacacataatattgaaatggaaaggtatgataat
gcaggtgaaaatcaactaaagagtaccagaagcgaagattctgctggtgatgtacatttt
aagcagctcactcttcagaatagtagattagaattgccagaatgggcaagcaatataact
tctgttttatggattcctatgcgagccattagtgatgagcttgttagagcgacatcagaa
ggggtggataatctgcagagacagagtctagtggatggattgaggacaatagctttgaaa
cttgatttcggagtatcgctcaaccaaacatttgagaggcacatagcagttcatttcact
gagccatttcacgtaagcacaagggtcagcgataaatgtaatgatggcacattacttttg
caggtgatactacattctcaagtaaaagctacatataccatctatgatgcttggatggac
ctccaagatggatttgctcacactggacaacgtgatggacgaccagcttcagcttttttc
ccgctagtcatttcccctacatcgaaggctggaattttgttcagtatatgcctttcgaat
atgaatcctgaagatgaacccaagcagcctcaggaagatagtattttgaatataaaatat
gaaatttctggtaacagaaatgttggagctcacagtcctgtggctttacctcatagtgga
gttgagaatgctaccgaacacttgacattcaggtgtgctgttggtttacagaggcctgtg
ctggacccttgccttgcagttggttttcttcctcttccttcaagtggtctcagagttgga
cagctcgttgccatgaaatggagagttgaaaggctaaaattttttgaggatagtgctcta
tctgaaaacaaacagaatgaagtattatatgaagtcagcgcgaattctgagaactggatg
attgctgggaggaagagaggttatgcagatctatccaaagatgaaggttcaagaatagtt
gtctcagttttgtgtgtcccacttgttgccggatatgttcgtccccctcaactgggtttg
ccagatgtgagtaagacaactataagttgcaatcctcctgggcctcacttggtctgtgtc
ttgcctccgcctctgagctcttccttctgtatacctgcttga
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