Daucus carota (carrot): 108218720
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Entry
108218720 CDS
T05350
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dcr01002
]
108218720
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108218720
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108218720
Peptidases and inhibitors [BR:
dcr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108218720
Ubiquitin system [BR:
dcr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108218720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
FBPase_glpX
Motif
Other DBs
NCBI-GeneID:
108218720
NCBI-ProteinID:
XP_017247289
UniProt:
A0AAF0WXF1
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All DBs
Position
4:33778457..33785858
Genome browser
AA seq
932 aa
AA seq
DB search
MAGQKIAVDAVSRSDSSRHINFHVQRRNDDKMRFNQGPRNFRMETLNSKSSNSERRSPKS
KVDGSDGLEMDPDELNFRVTFRKIGAGLANLGNTCFLNSVLQCLTYTEPLAAYLQSGKHQ
TSCRTSGFCALCAIQKHVSRALQSPGRILAPKEIVSNLRCISRSFRNSRQEDAHEYMVNL
LESMHKCCLPSGVPSESPSAYDRSLVHKIFGGRLRSQVKCMQCLSSSNKFDPFIDLSLEI
VKADSLYKALAHFTAEEQLDGGAKQYQCQHCKQKVRAHKQLTIHKAPYVLTIHLKRFGSY
LVGQKIDKRIHFGPTLDLKPFVTDPYDRDLKYTLYGVLVHAGWSTHSGHYYCFVRTSSGM
WYSLDDNQVVQVSERKVLEQKAYMLFYYRDTRNPVFKKADQKDNMSANAMGRPMSSNLKQ
ESKEAIQSAQTNTVLDSKATSLAQGDSSLNAALLLKNSQKDCSSKVFSSVTTEQHPMPKK
DPLLGPHSNSPLLKDSLKTTSVTSQEDGDCMPQKNISCTGSLKIQNMMNSTDVIVKSGSD
ENCKEGTDSVTGKDSLKSDSVAGKDTLNSVSKLPDDTAQASPKKDLNAVIAISSNCCTLQ
TSRGITLGQEVSGKNHGVVSELDPCVGSKEQTLLPPSSTIRENCQEMKDIQSAESSGLPN
RTSVQKTVLTGRHVKQMKKLPKYPMMKMQLSSNIFMAASLRVRKKKHKRNKKCISETRHL
SEKILVDANGIPLDLQPSTCNGSQPFYNMARSQRKVKKAQSKKNKKSDVNNLVLNSKVDS
VTGVTDGEVVKGVGQNCDVLTYQSMKSCITGSEANEWNVRGDYNSKDSTKQSMQKGVVGM
LTRGLEETIVARWGELDSQSQMIDTSSLNEFAIGYVADEWDKEYDQGRRKRIRSCKHDFS
KRNPFQEIATMNAKVKRARMDQSDSGNRPFRI
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcagaagattgctgtagatgctgtatccagatccgattcatctagacatatc
aattttcatgtccagaggaggaatgatgataaaatgaggtttaatcagggtccgcgaaac
tttcggatggagactctcaattccaagagctcgaattcagagaggcgtagtccgaaatct
aaggtggacgggtcggatgggttggaaatggatcctgatgagctcaattttcgggtcact
tttcggaaaattggtgctggtctggccaatcttggaaacacttgttttttgaattcagta
ttgcagtgtctgacatacactgagcctttagcagcatatttgcagagtggaaagcatcag
acttcgtgtcgtacttctggattttgtgctctgtgtgctatccaaaaacatgttagccgt
gctctgcagtcacctgggagaatattagcacccaaggagatagtctcaaacttgaggtgc
atatcgcgtagttttcgtaattctaggcaggaggatgctcatgaatacatggtaaacttg
ctagaatcaatgcacaagtgctgcttaccttcaggagtacctagtgaatctccgagtgct
tatgatagaagtttggttcacaaaatttttggtggccgcctccgtagtcaggtgaaatgt
atgcaatgtttgtcctcttccaacaaatttgatccatttatagacttgagccttgaaatt
gtaaaagcagattctttgtataaggcacttgctcatttcacagccgaagaacagttagac
ggtggggcgaagcaatatcagtgccaacactgtaagcagaaagttagggctcataaacag
cttaccatacacaaggcaccttatgtactgactattcatttgaagaggtttgggtcatat
ttagttggacaaaagatagacaaaaggatccatttcggccctacattggacctaaaaccc
tttgtaactgatccttatgatagggatttgaaatacaccctttatggtgtcttggttcat
gctggatggagtactcattctgggcattattactgctttgtgcgcacatcaagtggcatg
tggtactcccttgacgacaatcaggttgttcaagtcagtgagaggaaggttttggagcaa
aaagcttacatgttgttctattatcgagatactagaaatccagtatttaagaaggcagat
cagaaagacaacatgtctgcaaatgctatgggaaggcctatgtcttctaatctcaaacaa
gaatcaaaagaagccatccagagtgcacaaacaaacacggtattggatagtaaagcaact
tctcttgctcagggagactcatcattaaatgcagctttgttgctgaaaaactctcaaaaa
gattgctctagtaaggtttttagcagcgtaactactgaacagcacccaatgcctaagaaa
gaccctttgctgggacctcattcaaattcgccgctgttaaaggattctttgaagactact
tctgtcacgagccaagaagacggagattgtatgccacaaaaaaatatatcttgtactggt
tctcttaaaatacaaaatatgatgaattcaactgatgttattgtcaaatctggttcagat
gaaaattgtaaagaaggtactgattctgttactggtaaagattccctgaagtcagattct
gttgctggtaaagataccctgaattcagtctctaaattaccagatgacacagctcaggcg
agccctaagaaggatcttaatgcggtaattgctatatcatccaactgttgcacccttcag
acatctcgtgggattactttagggcaggaggtctctggaaagaatcatggagtcgtctcc
gaattggatccttgtgtgggatcaaaagaacagaccttgttgcctcctagttcaacaatt
agagaaaattgtcaggaaatgaaagatatccaatcagcagaatcatcgggcctgccaaac
agaacatcagtacaaaagactgtacttacagggaggcatgtcaagcagatgaagaagctt
ccaaagtatccaatgatgaaaatgcagcttagctcaaatatttttatggcagcgtcttta
cgtgtgcgcaagaaaaagcataaaagaaacaaaaaatgcatatcagagaccagacatctc
agtgagaagattttggtggatgcaaatggcataccattagatcttcagccatctacttgc
aatgggtcccagcctttttataatatggctaggtcgcaaagaaaagtgaaaaaagctcag
tccaagaagaataaaaagagtgacgtcaataatttggttttaaactccaaggttgattct
gtgacgggggtcaccgatggagaggttgttaaaggagttggtcagaattgtgatgtgctt
acttatcaatcaatgaagagttgtataactggttcagaagcaaatgaatggaatgtcaga
ggagattataactcaaaagatagcacaaaacagtcgatgcagaagggtgtggtcggtatg
ctcaccagaggcctagaggagacgatagttgcacgttggggtgagttagactcccagtcg
caaatgatagataccagtagtctgaacgagtttgctattggttatgttgcagatgaatgg
gataaagaatatgatcaagggaggaggaagagaatacgaagttgcaagcatgacttcagc
aaacgaaatccattccaagaaatcgcgaccatgaatgccaaggtaaaaagggcaaggatg
gaccagtctgactctggaaacaggccattcaggatatga
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