Daucus carota (carrot): 108218831
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Entry
108218831 CDS
T05350
Name
(RefSeq) translation initiation factor IF-2, chloroplastic-like
KO
K02519
translation initiation factor IF-2
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
dcr03012
]
108218831
03029 Mitochondrial biogenesis [BR:
dcr03029
]
108218831
Translation factors [BR:
dcr03012
]
Eukaryotic type
Initiation factors
MTIFs
108218831
Prokaryotic type
108218831
Mitochondrial biogenesis [BR:
dcr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
108218831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
MMR_HSR1
GTP_EFTU_D2
IF2_N
Ras
RsgA_GTPase
Arf
Roc
Motif
Other DBs
NCBI-GeneID:
108218831
NCBI-ProteinID:
XP_017247441
LinkDB
All DBs
Position
4:27221186..27228162
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AA seq
1011 aa
AA seq
DB search
MLFSVNMSSIASLASLGCTCSSAQFEGSLSFSSRICFSRNSCSFREVRFGKKWRYECICK
CSITTECIAQENSVSLDTTFRGSNVDESDLVRNASPRHVLESGPKAELLLGINGVKWDRL
KPNWEDEKLKVEEEERNMVIESLGEVLEKAEKLETSKKAVTSARRPPTFTGANQRNAPVT
RRTVKKSKTLKSVWRKGNPVATVIKVVKKQPKNGDVDKGEIITKTVVRVESPLAAPFRPD
QSSLKVQPELQVRPSAAPKPIIERPILKDGAATALSAVGATSAATTKEHKPILIDRFASK
KSAVDPLIAESVLAPPKPKKASSSGRFRDDFSRKTGLSGGSRRRMAKNDIPDEEASELDG
FIHGVVTSRKGRKWSKASRKAARLQAARDAEPVKAEILEVEEDGMLTMELAYNLAVSEGE
ILGFLYSKGIKPDGVQTLDKDIVKMVCKEYDVEVIDAAPIRVEEMAKRKEILDEDDLDKL
EQRPPVLTIMGHVDHGKTTLLDHIRNTKVAASEAGGITQRIGAYKVQVPIDGGFQPCVFL
DTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAGVPIVVAINKIDKD
GANPERVMQELSSIGMIPEDWGGDIPMVQISALKGDNVDDLLETVMLVAELQELKANPHR
NAKGTVVEAGLDKCKGPVATFIVQNGTLKKGDIIVSGEAFGKVRALYDDGGKLVSEAGPS
FPIQVIGLNNVPFAGDEFEVVGALDIARERAESRADSIRLERISAKAGDGKVTLSSFASA
VSSRTHTGLDLHQLVIIMKVDLQGSTEAITQALQVLPQDNVTIKFLLQATGDISKSDVDL
AVASKAICFGFNVRAAGSVKSYADNKGVEIRLYKVIYELVDNVRTAMEGLLDTVEDQIPI
GSVEVRAVFSGGSGRFAGCMVTEGKVAKDCGIRVCRKGKTVIVGALNSLRRIKETVREVS
AGLECGIGIDGFNDWEAGDTLEAFNTVQKHRTLEEASASMATVLEELGIEG
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgttatttagtgttaatatgagttctattgcttcattagctagtttaggatgtacttgt
tcttctgcccaatttgagggctccctttcgttttctagtcgtatttgcttttctagaaat
tcttgtagttttcgggaagtaaggtttgggaagaaatggaggtatgagtgtatttgtaaa
tgttcgatcaccactgagtgcattgctcaagagaattcggtatcgcttgatactacattt
agaggtagtaatgtggatgaaagtgatctcgttaggaatgcatcgcctagacatgtatta
gaatctgggcctaaggctgagctccttttgggcatcaatggtgtgaagtgggaccgttta
aaacctaattgggaggatgagaagttaaaagttgaagaagaagagagaaatatggtgatt
gagtctcttggagaggtactagagaaggctgagaagctagaaacaagtaagaaagctgtc
acatcagctagaaggccaccaacatttacaggcgccaaccagagaaatgcaccggttact
cgtagaacagttaaaaagtcaaagactttaaagagtgtgtggcgaaagggaaacccagtc
gccacagttataaaggtggttaaaaaacaaccaaagaatggggatgttgacaaaggagaa
ataattacaaaaacagtcgtgagggttgagtcaccacttgctgctccttttagaccagat
caatcgtctttaaaagtccaaccagaactgcaagtgagaccatctgcagctccaaagccg
ataattgagagacccattttgaaagatggtgcagcaacagcgttatcagctgttggagcc
acctccgctgcaacaacaaaagaacacaagccaatattgattgacaggtttgcgtctaag
aagtctgcagtagatcctttgattgcagaatctgtattggcacctcccaaacctaaaaaa
gcttcttcgtctgggaggttcagggatgacttcagtagaaaaactggtctatctggagga
tcacgtaggcgtatggctaagaatgatattcctgatgaggaggcatcagaacttgatggt
tttattcatggtgttgttacatcaaggaaaggcaggaaatggagcaaggcgagtaggaaa
gcagctagacttcaggcagctagagatgccgaaccagtgaaagctgaaattttggaggta
gaggaagatggtatgttgaccatggagttagcctacaacttggctgtcagtgaaggtgaa
attcttgggtttttgtactcgaaggggattaagcctgacggtgtgcagactcttgacaaa
gacattgtgaaaatggtctgcaaagagtatgatgtagaagtaattgatgctgctccaatt
agagtggaggaaatggcaaaaaggaaggaaattttggatgaagatgacctggacaaatta
gaacagagacctccagtgctcactataatgggccatgtagatcatggaaagacaactttg
ttggatcatattcgaaataccaaggttgcggcctctgaagctggaggtattactcaaaga
attggtgcttataaggttcaagtgccaattgacggagggtttcaaccatgtgtattttta
gatactcctggacatgaggcatttggggcaatgagagcccgtggagccagggtcacagac
attgctataattgtagttgcagctgatgatgggattcgcccccaaacaaatgaggccata
gctcatgccaaagcagcaggagtgccaatcgtggttgccattaacaagattgataaagat
ggcgctaatccggagcgggtgatgcaagagctttcctcaattggtatgattccagaagac
tggggtggtgatatcccaatggttcaaatcagtgctcttaaaggagataacgtggatgac
cttctggaaactgtaatgcttgtcgcggagttgcaagaattgaaggctaatcctcacaga
aatgccaaaggcacagttgttgaggctggtcttgataaatgtaaaggaccagtagctaca
ttcattgtgcagaatggcacactcaaaaaaggagatataatagtgtctggcgaagctttt
ggaaaggttcgggcattatatgatgatggtggaaagctagtcagtgaagctggtccctcc
tttccaatacaggtcattggattaaataatgttccatttgctggtgatgagtttgaggtt
gttggtgcccttgatattgcacgggaaagggcagagtcaagagctgattcaatacgactt
gaacgcatttcagctaaagctggagatggaaaggttacactttcgtcctttgcttccgcc
gtttcatcaagaacgcatactgggttagatctgcaccaactggttatcataatgaaggtt
gatcttcagggatctactgaggccatcacacaggcactacaggtgcttccccaagataat
gtcactattaagttcctcctgcaagcaactggagatatcagcaagagcgatgttgatctt
gcagtcgccagtaaagcaatttgttttggatttaatgtcagagcagcaggttctgtgaag
agctatgctgacaataaaggagttgagatccgactgtacaaagttatatatgaactcgtt
gacaacgtgcgaactgcaatggagggactcttggacactgttgaggatcagataccaatt
ggttcagtagaagtacgagctgtattcagcggtggtagtggtcgttttgctggatgtatg
gtaacagaaggaaaagtagcgaaagattgtggaattcgggtttgtagaaagggtaaaaca
gtcatcgttggagctctcaactccttgagacggattaaggagactgtcagagaggtaagt
gccgggttagagtgtggcattggaattgatggctttaacgattgggaggctggagacact
ctggaggctttcaacacagtacagaagcaccgaacacttgaagaggcatcagcgtcaatg
gcaacagtgcttgaagaactaggaattgagggataa
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