Daucus carota (carrot): 108218863
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Entry
108218863 CDS
T05350
Name
(RefSeq) actin-interacting protein 1-2
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dcr04990
]
108218863
Domain-containing proteins not elsewhere classified [BR:
dcr04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
108218863
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_Vps41
NBCH_WD40
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
KNTC1_N
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
108218863
NCBI-ProteinID:
XP_017247494
UniProt:
A0A165X693
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Position
4:complement(34389434..34396004)
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AA seq
609 aa
AA seq
DB search
MANLSETYASIPSTERGRGILISANPKSNAILYCNGRSVFIRNLDKPLDVSVYTDHAYNT
TVARFSPNGEWVASADVSGTVRIWGSYNDHVLKNEFRVLTGRIDDLQWSPDGLRIVASGD
GKGKAFVRAFMWDSGTSVGEFDGHSRRVLSCAFKPTRPFRIVTCGEDFLVNFYEGPPFRF
KLSHRDHSNFVNCVRFSPDGSKFITVSSDKKGILYDAKTAQKIGELSMEDGHKGSIYAVS
WSPDSKQVLTVSADKSAKIWAISEDGHGKVTKTLTCTGTGGFEDMLVGCLWHNNYLVTVS
LGGTMFVFSATDLDESPVILSGHMKNVNSVVVLKNSPNVILSCSYDGLIVKWTKGIGYTG
KLNKVIDKIKCFVAADEEIVTSGFDNKVWRISLQGDQCGEAESVDIGNQPKDLSIAILSP
ELVLVAIDSGVALLLGTKVLSTVNLGFPVTACTLAPDGSEAIVGGEDGKLHIYSVKGDSF
NEEAVLEKHRGAITVIRYSPDVSMFASGDVNREAVVWDRASRELKLKNMLYHTARINCLA
WSHDSSMVATGSLDTCVIIYEIGKPASSRITIKGAHLGGVYGLAFTEENSVISSGEDACI
RLWKLTPQG
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatctctccgaaacctatgcttccatcccctcaacagaaagaggcaggggtatt
ctaatctcagcaaacccaaaaagcaatgcaatcttgtactgtaatggcagatcagtgttc
atcagaaaccttgacaagccactagatgtgtctgtctatactgaccatgcttataacaca
actgttgcgaggttttctcccaatggggagtgggttgcttctgctgatgtttctgggact
gtgaggatctgggggagctacaatgatcatgttttgaagaatgagttcagggttttgact
gggaggattgatgatttgcagtggtctcctgatggcttgaggattgttgcttctggtgat
gggaagggcaaggcttttgtcagggcttttatgtgggactcggggaccagtgttggagaa
tttgatggacattccaggagagttctcagttgtgcatttaagccaacaagaccattccga
attgtcacatgtggagaggactttttagttaatttttatgaaggaccgccatttagattc
aagctttcccatagggatcattcaaattttgtcaattgtgtgaggttctctccagatggc
agcaaattcatcactgtaagctcagacaaaaagggtatcttatatgacgcaaaaactgca
cagaaaattggagagctgtctatggaagatggccataaaggtagcatatatgctgttagc
tggagtccagacagtaaacaagtgctaacagtttctgctgacaagtccgcaaaaatatgg
gcaatatctgaggatggccatgggaaggtcacaaaaacattgacttgcaccggaactggt
ggttttgaagatatgctcgttgggtgcctttggcataacaattatctcgttactgtctct
cttggtggcacaatgtttgtgttttcagcaactgatcttgatgaatccccagtaatactt
tctggacacatgaagaatgtaaattctgtagtagtgcttaaaaacagcccaaacgtcata
ttgtcatgcagctatgatggactaatagtaaaatggacaaaaggcattggatatactggt
aaactgaacaaggtgatcgataaaattaaatgttttgtggctgctgacgaggaaattgtt
acatctgggtttgacaataaggtttggaggatttctctacaaggagatcaatgtggggag
gcagaatctgtagacattggcaatcaaccaaaggacttgagtattgctattctctctccg
gaacttgtcttggtcgcaattgattctggagtcgccctccttctgggtacaaaagtgttg
tcaactgttaaccttgggtttccagttactgcatgtacgcttgcacctgatggaagtgaa
gcaatcgtgggtggggaggatggtaaattgcacatatattctgtcaagggtgatagtttc
aatgaagaggcagttctcgaaaaacatcggggtgctattactgtaattcgttattcccca
gatgtttccatgtttgcttcaggagatgtaaatcgtgaagctgttgtatgggatcgtgct
tccagggagttaaagctgaaaaacatgttatatcacactgcgcgcataaactgcctggct
tggtctcacgatagcagtatggttgcaactggatcacttgatacatgtgtcatcatatat
gaaattggaaaaccagcatcaagtcgaataactatcaagggagctcacctgggtggggtt
tatggactggctttcaccgaagaaaacagtgtaataagttccggtgaagatgcttgcatc
cgtttatggaaattaaccccacaaggataa
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