Daucus carota (carrot): 108218902
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Entry
108218902 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108218902 isoform X1
KO
K05294
GPI inositol-deacylase [EC:3.-.-.-]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
108218902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108218902
Membrane trafficking [BR:
dcr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
108218902
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PGAP1
Abhydrolase_6
Abhydrolase_1
Palm_thioest
DUF676
Hydrolase_4
Motif
Other DBs
NCBI-GeneID:
108218902
NCBI-ProteinID:
XP_017247550
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All DBs
Position
4:complement(28339632..28352461)
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AA seq
1103 aa
AA seq
DB search
MAMRMKSVMQGVRAKFSVIVLVLITLGIAAASIYGLLKPISNGCTMTYMYPTYIPISTPK
NVSAEKYGLYLYHEGWQKIDFDEHIKQLSGTPVLFIPGNGGSYKQVRSLAAESERAYQGG
PLENELYQQATLTLEEDGGPINVNNISVPTQYSSFMDWFAVDLEGEHSAMDGQILEEHTE
YVVYAIHRILDQYKESRDARKSEGAAIYGSLPRSVILVGHSMGGFVARAAIVHSHLRKSA
VETIITLSTPHQSPPVTLQPSLGHYYTHVNQEWRKGYEVHTSRSGHYISGPKLGHIVVVS
ISGGIHDFQVRSKLESLDGIVPPTHGFMISTTSMQNVWLSMEHQVILWCNQVVVQVSHTL
LHLIDSKTSQPFTESRERLAIFTKMLHSGVPESWLKQSQATQKSLHASSKNGILPGSHVH
TLPACPSTIRWNEAGLERDLYIQTPTVTVLAMDGRRRWLDIKKLGLNGKGHFVFVTNLVP
CSGVRLHLWPEKGNSASDLPLTKRVLEVTSKMVKIPSGPAPRQIEPGSQTEQAPPSAVFM
LDPKDMYGFKFLTISVAPPPVFSGRPPPATSMAVGQFFDPDEGKTVFSPYLLLQSMVSQQ
DMILKEDHPLALDLSFSISLGLLPVKFSLEPTGCGIQKSELVEEVKDMEINKLCKRRCFP
PVALAWDVSSGLHIFPNLYSHTIMVDSSPGYWDSPKGSEKTTLLLLVDPHCSYKTSISVS
VAAAAGRFMLLYWSQIIGFSFAVVFFALMQQAYSWELDLPIPSMLTALESNMRMPLPFFS
LVITPIVAALFYSFMSSQRFPSIISFFVISILCYAFANGIVVVLILISQWVFYVAASIHV
FIKKWWQWETSLLSFKVVRIVRFNPSLVTVFAAMSLACFVHPAFGLAILLFSHALCCHNA
LSSFLTASFRSHARSRELFDFGDRGSSEYKRLQIKSDSRTNKSLPVDEHSSNSPDSARSY
GDTQLEIFHHQHGLLVLHLMSMLMFIPSLVAWFQRFGTGQRFPWFLDSALTLGIILHGVC
GSKPEYSFWFPLPGSDRWEVKQSFGYLLGGFACCLYALTMAPYGAFYAMACIGIVAFTFR
IIDRRNRERGDAYYSNRKHSHRH
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgagaatgaagtcagtaatgcagggtgttagagctaagttcagtgtaatagtt
cttgtgcttattacattagggatcgctgctgcatctatatatggtctgctaaaaccgatt
tcgaatggttgtaccatgacgtacatgtatcctacttatatccccatttccacgccaaaa
aatgtgtcagctgagaagtatggtttgtacttgtatcacgaaggatggcaaaagattgat
tttgatgagcatattaagcagcttagtggaactccagttttatttatcccagggaacggg
ggtagctacaaacaggtaaggtccttggcagcagagtccgaaagggcttatcaaggaggc
ccacttgaaaatgagctttaccaacaagctactctaacacttgaagaggatggaggacct
ataaatgtaaataacatttcagtacctacccagtatagttccttcatggactggtttgct
gtggatcttgaaggtgaacattctgcaatggatggtcaaatacttgaagaacacacagaa
tacgtagtatatgctattcacaggatcttggatcaatataaagaatctcgtgatgcccgg
aaaagtgaaggtgcagccatatatggaagtttacctcgaagtgttatactagttggccac
tctatgggtggttttgttgcaagagcagcaatagttcactcgcatttaagaaagtctgca
gtggaaactattattacgctctcaaccccgcaccagtcacctcctgtgacactgcagcca
tccttaggtcactattatacacacgtaaatcaggaatggagaaagggatacgaggtccat
acctctcgaagtggacattacatatctggtccaaaacttggccacatagttgtcgtttcc
atttccggtggtatccatgattttcaggtacggtcaaaattagaatcccttgatgggatt
gtgccacctacccatggttttatgattagtactacaagcatgcagaatgtttggctgtca
atggagcaccaagttattttatggtgcaatcaagtcgttgtgcaagtgtcacatactctg
cttcatctaattgactctaaaaccagccaaccatttaccgaatcaagagaaaggctcgca
atatttaccaaaatgttacatagtggagtaccagaaagttggttgaaacagtcgcaagca
actcagaaatcgctacacgcttcttcaaagaatggaatcctaccaggatctcatgtgcac
actttacctgcctgccctagtactattcgttggaacgaggctggattagaaagggatcta
tacattcaaacccctactgttactgttttagcaatggatggcagaagacggtggctggac
attaaaaaactggggctgaatggaaaaggccacttcgtatttgttacgaaccttgttccc
tgttctggggttagacttcatctttggcctgaaaagggcaattctgcttcagacctgcct
cttactaaaagggttctagaagtgacatcaaagatggtaaaaatcccatcaggtccagct
ccaaggcagattgaaccaggtagtcagactgaacaagcacctccatctgctgtatttatg
ctggatccaaaggatatgtatgggtttaaattcttgaccatctcagttgcacctcctccg
gttttttcaggaagacctccgcctgcaacttccatggcagttgggcagttttttgatcca
gatgaagggaaaacagtattctcaccatacttgttgcttcaatcaatggtttctcaacaa
gacatgatattgaaggaggatcatcctcttgctttagatctatccttctctattagttta
ggccttctgcctgttaaattctctttagaaccaacaggatgtgggatacaaaagtcagaa
ctggttgaagaggttaaagacatggaaattaacaagctttgcaaacgtcgatgttttcca
cctgtagcacttgcttgggatgtgagttctggtctgcacatatttccaaacttgtactct
catacaattatggtggattcttcaccagggtattgggattcacccaagggttctgagaag
accactcttttattactggttgacccgcattgttcatacaaaactagtatctctgtatct
gttgctgctgctgctggtagattcatgcttttatattggtcacagatcattggtttctcc
ttcgcagttgtgtttttcgcactgatgcagcaagcatattcatgggagcttgatctgcct
attccttcaatgctaacagcattggaatcaaatatgagaatgcctttgccatttttttcc
ctagtcattacccccattgtagctgccttgttctattcctttatgagttctcagcgattt
ccttcgatcataagcttttttgtgatctcgatactttgctatgcatttgcgaatgggatt
gttgtcgtgcttatattgatctctcaatgggttttctatgtggctgccagtatacatgtt
ttcatcaagaaatggtggcagtgggagactagtttattgtcattcaaggtggtaaggatt
gtcagattcaatccttcactcgtcacagtgtttgcggctatgtcattggcttgctttgtt
catccagcttttggtcttgctatattgctgttttctcatgccttgtgctgtcataatgca
ttgtccagttttttgacagcttcctttcgcagccatgctcgaagtagggaattgtttgat
tttggtgatagaggcagcagtgaatataaaaggttacaaatcaagtctgatagtagaaca
aataaaagtctgcctgttgatgagcacagttccaatagtcccgactctgcaagaagctac
ggcgatacacagctggagatcttccaccaccagcacggcctgctggtcttacatcttatg
tctatgctgatgtttattccatcacttgtggcttggttccagagatttggtactggtcag
agatttccatggttcttagattcagcgctgacgcttggtatcatcctccacggtgtgtgt
ggttcaaagcccgagtatagtttttggtttcccttgccaggcagtgacagatgggaagtg
aaacagagttttggctacctgcttggtggattcgcttgttgtttatatgccttgaccatg
gctccttatggagcattttatgcaatggcctgcatagggatcgtcgctttcacttttaga
attatagatagaaggaatagggagagaggagacgcctactatagcaatcgaaagcattct
catagacactga
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