Daucus carota (carrot): 108218929
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Entry
108218929 CDS
T05350
Name
(RefSeq) glutamate receptor 3.4
KO
K08500
syntaxin of plants SYP6
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108218929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108218929
Membrane trafficking [BR:
dcr04131
]
SNARE
SNAP-25[C] (Qc)
STX6
108218929
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
STX6_10_61_N
Peripla_BP_6
SBP_bac_3
Lig_chan-Glu_bd
SNARE
Motif
Other DBs
NCBI-GeneID:
108218929
NCBI-ProteinID:
XP_017247593
UniProt:
A0A162ADS9
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Position
4:complement(49256742..49267577)
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AA seq
1182 aa
AA seq
DB search
MSSAQDPFYIVKEEIQDSIEKLQSSFHKWEDLRLDGDERAHLTKEILAGCESIQWQVVEL
EKTISVAARDPSWYGLTEVELEKRRRWTSTARTQVSNVKNAVVAGRDNLNASATRRELMR
LPDSNQSDRSNQYIARNNDDFISSESDRQLLLIKQQDEELDELSASVERIGGVGLTIHEE
LLSQERILDELGTEMDSTSNRLDFVQKKVAMVMKKTSVKGQIMMIFFLIVLFIILFVLTK
ESRYQLLVFAKMDGHVLARAAVFTMILCMGVPVKVVGRNVSSSKQAVINIGALFTVNSVI
GRSVKPAIKAAVDDVNSDSSILQGKHLNLIMSDTNCSGFLGTVEALQLMVNDVVAAIGPQ
SSGIAHIISHVVNELHVPLLSFGATDPTLSALQFPYFLRTTQSDYFQMQAIADLVEYYKW
REVIAIFVDDDYGRNGISALGDALAKNRASIAYKAAFTPGAPISDINDLLVGVNLMESRV
YVVHVNPDSGLRVFDVANHLGMMTSGYVWIATDWLSSVMDSSGTMDPDEMDLLQGVVVLR
HHTPDSNSKKKFSSRWNQIKDKETSSFNPYALYAYDSVWLLSRALDVLLSEGENISFSYD
PKLKETKGSTLHLSTLRSFDQGDKLLRILTTMNFTGLSGQIEFDQDRNLIHPAYEILNIG
GTGSRRIGYWSNQSHLSVTAPGSSYMKPLNNSAKDQKLYDVIWPGETVKVPKGWVFPNNG
KALQIAVPYRVTYKEFGTRDKGPIGVRGYCIDVFEAAVDLLPYPVPRTYILYGDGQRNPS
FSDLVLDVSQHKYDAAVGDVTIVTNRTRIVDFTQPFMESGLVVVVPVNKVKSSAWAFLKP
FSWEMWSVTGAFFLFVGAVVWILEHRENHEFRGTPRQQLITVFWFSFSTMFFAHRENTVS
TMGRMVLILWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDSLAKSNVPIGVQDGSFAL
NYLIDELQIAASRIKIMKTQDDYIDELRKGPKGGGVAAIVDELPYVELFLSNVNCEFRIV
GQEFTRSGWGFAFQRDSPLAVDLSTAILQLSENGDLQRIHDKWLSKNSCSAQGNQVDDSR
LSLTSFWGLFLICGVACFISLTVFFFRVYFQYRRYIPEDEENGFEDPESVSSDKRPSRGT
SFKKFVDTKEIEIKDKLKRKGSESKSKQQISQIADGQLSSPS
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagctcaagatccattttatattgtcaaagaggaaattcaagattctattgag
aagctgcaatctagttttcacaaatgggaagatttgagattggatggtgatgagcgtgct
catcttactaaagagattcttgcgggttgcgagagtattcagtggcaggtggttgagttg
gagaaaacaatttctgtagcagctagggatccttcttggtatggactcactgaagttgaa
cttgaaaaacgaaggaggtggaccagcactgctcgtactcaggtgagcaatgttaagaat
gcggtagtggcaggaagggacaacttgaatgcgagtgccacacgtcgtgaactcatgagg
cttccagattctaatcagtcagatagatccaatcagtatattgctagaaacaacgatgat
ttcatatcatcggagtcggacagacagttgcttctcataaagcaacaggatgaagaattg
gacgagcttagcgcaagtgtggaaagaattggaggtgttgggcttacaatacatgaagaa
ctcctttcacaggagagaatactggatgaattggggaccgagatggatagtacatcaaat
cgtcttgattttgttcagaaaaaagtggctatggttatgaagaagactagtgtgaaagga
cagatcatgatgatattcttcctaattgttttgttcataattttatttgttttgactaaa
gaatcaaggtatcagttgctggtttttgcaaagatggatggccatgtccttgcaagggca
gcggtgttcacaatgattctttgtatgggggtgccagttaaagttgtgggtagaaatgtt
tcttcgtcgaaacaggctgtgatcaatattggagctctgtttactgtaaattcagtgatt
ggtaggtcggtgaaaccagcaattaaagctgctgtagatgatgtgaactctgattcaagc
attcttcaaggaaagcacctgaacctgattatgagcgatactaactgcagtgggtttcta
ggcactgttgaagctttgcagctgatggtaaatgatgtagttgctgcaattggtccacag
tcatctggaatagctcatattatatcacatgtcgtgaatgaacttcatgtacctcttcta
tcatttggagccactgaccccactctttctgccttacaatttccatatttccttcgtact
acgcagagtgattattttcagatgcaggcaatagctgatttggttgaatattataaatgg
agagaagtaatagccatctttgttgatgacgattatggtaggaacggaatctctgcactt
ggtgacgcactagcaaagaatcgtgcgtcgatcgcttacaaggccgcctttacgccagga
gccccgataagtgacatcaatgatttattagttggagtgaatctgatggagtctagggtg
tatgtcgtacatgtaaatcctgactccggtcttagagtatttgacgtagcaaatcatctt
gggatgatgaccagtggctatgtttggattgctacagattggctttcttctgttatggat
tcatcaggaacaatggatcctgatgaaatggatcttttacagggagttgtcgtgcttcgc
catcacactccggattccaattctaaaaagaagttttcatctaggtggaaccaaattaaa
gataaggaaacttctagctttaacccttatgcactgtatgcttatgattctgtttggtta
ctttcccgtgctcttgatgttctgcttagtgaaggtgaaaatatatctttttcctatgac
cccaagttaaaagaaacaaaaggaagcactctacatttgtcaacacttcgtagctttgat
cagggtgataaactacttcgcatacttacaacaatgaacttcacaggtctaagtggtcaa
attgaatttgatcaagaccggaatttgattcatccagcatatgaaattcttaacattggt
ggcacaggttcacgcagaataggttactggtcaaatcaatctcatctttctgtcacagct
cctggaagttcatatatgaagcctttaaacaattccgctaaagatcaaaaactatatgat
gtaatatggcctggtgagactgttaaagttcctaagggttgggtcttcccaaacaatggt
aaagctttgcaaattgcagttccttatcgagtaacatacaaagaattcggtacaagagac
aaaggtcctattggagtcagaggatactgtattgacgtctttgaagctgcagtggacctg
ttgccttatcctgttcctcgcacatacatactatatggagatggtcaaagaaaccctagc
ttcagtgatcttgttcttgatgtttctcaacataaatatgatgcagctgtcggagatgtt
accattgtcacaaataggacaaggatcgtggacttcacacagccttttatggaatctgga
cttgtcgtagttgttccagtcaataaagtaaaatcttctgcttgggctttccttaaacca
tttagttgggaaatgtggagtgtcacaggtgctttctttctttttgttggagctgttgtt
tggattcttgagcatcgcgagaatcatgagttccgtggcactccccgacaacaactcatt
acagtcttttggtttagtttctccactatgttttttgctcatagagagaacaccgtcagc
actatggggcgcatggtgcttattttatggctatttgtagtgttgattatcaattcgagc
tacacagctagtttgacatcaatcctcacagtgcagcagttatcgtcacagattgaaggg
atagacagtttagccaagagcaatgtaccaattggagttcaagatggatcatttgcatta
aattatttgattgacgagcttcagatagctgcgtcgaggataaaaattatgaaaactcag
gatgattatattgatgagcttcgtaaaggtccaaaaggtgggggtgttgctgctattgtc
gacgagcttccttacgttgagctcttcttgtctaatgtgaactgtgaattcaggatagta
ggacaggaatttacaagaagcggatggggatttgcattccagagggactctcctcttgca
gtcgacttatcgactgcaattcttcaactatcagaaaatggcgatctgcaaagaatccac
gacaaatggctgtcaaaaaactcttgctctgcacaaggcaatcaagttgacgacagccgg
ctctctctaaccagcttctgggggctattcctcatctgtggtgtggcctgctttatttct
cttaccgtatttttctttagagtttactttcagtatcgtagatatatcccagaagacgag
gagaacggatttgaggaccctgaatctgtaagcagtgataaacggccctctcggggtact
agctttaaaaagtttgtggatacgaaagaaatagagatcaaggataagcttaagcgtaag
ggtagtgagagcaaaagcaagcaacaaatcagccaaattgcagacgggcaactcagctca
ccttcctga
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integrated database retrieval system
