Daucus carota (carrot): 108218953
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Entry
108218953 CDS
T05350
Name
(RefSeq) eukaryotic translation initiation factor 5B isoform X1
KO
K03243
translation initiation factor 5B
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
dcr03012
]
108218953
Translation factors [BR:
dcr03012
]
Eukaryotic type
Initiation factors
eIF-5
108218953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
ATP_bind_1
Roc
Motif
Other DBs
NCBI-GeneID:
108218953
NCBI-ProteinID:
XP_017247632
UniProt:
A0AAF0WYI8
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All DBs
Position
4:complement(45076048..45082181)
Genome browser
AA seq
1065 aa
AA seq
DB search
MSQTKPIEGAESKKMDGEVVDDDGSVVTSSMFTTLGLEFLEDYDGDVENLGVRDQDGYIA
SSDDENRGTSASGSKDTGDDVVVNLKGNKRRKKGGKIVREEDDLDKILAELGVASPSASA
DNNVLIDQTEANVAAGNGVVSEIEEGNSEMSAAAKKKRKKKERKKEKKAAAAAAAASSAE
EKHEEIINQVAGEEKKVSKHVKNMQKRLAKIKAEAERKNREEEERLKKEEQERLEQEKLV
REAEERKRLKKEKRLRKKQEGKILTGKQKEEARRLEAMRNQFLASAGGLPLTSTALKRPE
YQTKKSNPHSQENGCTSSNTNEITEANKKQEAMPCLDSLETEEVEEMNLMDVKGEPDVVE
EDVTEEDDDEEWDAKGLDDYDLDILGKYIEFDDEQTELEPKSVLNNGIKSSPTVTCYTKP
SMFTEKVSSTALVEFQDNIKSLLIGDVAADSKQRAIAEKKVSQKADSENLRSPICCIMGH
VDAGKTKLLDCIRGTNVQENEAGGITQQIGATYFPAEILKDKTRELKPDAALKVPGLLII
DTPGHESFINLRSRGSGLCDIAILVVDIMDGLKPQTVESLKLLKMRKTPFIVALNKVDRL
YGWKTCQNAPFVKAKNQQCKDVQNEFNKRLTEIIGNFKEQGWNSDLYYKIKNKDMGETIS
IVPTSAISGEGIPDMLLLLVKWCQKTMVDKLTYSEKLQCTVLEVKASEGDGTTIDVVLVN
GVLHEGDQIVVCGMQGPIVTTIRALSTPHPMKELRVKGTYLHHKEIKAAQFIKIAAQDLK
HAIAGTNIFVVGPDDDLEVIKKLTMGDKKTVMDRTDKTGKGICVQAPTLGSLEALLDFLK
TPEVNIPVGGIGIGPVHKKDVMKARVMLEKKKKEYATILAFDVKVSPDAWELADKYGVRI
FIADTIYSLIHQFKAYLNTHKEEKKKEVADETVFPCVLKIIPGRVFNKKDPIILGVDVLE
GIAKVGTPICISQKEFIDIGRITHIRNNEQPVDLAKKGSAVSIKITGSNSLEKQMMFGRQ
FNTEDLLVSHLSGRSIDILKELYWDELSDNLRKLVVNLKKLFKIQ
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaacgaagcctattgagggggctgagtcgaaaaagatggatggtgaagttgtt
gatgatgatggttctgttgtgactagttctatgtttactactttgggtttggagtttctt
gaggattatgatggtgatgtcgagaatttaggtgtccgagatcaggatggctacattgcc
tctagtgatgatgaaaatcgcggtacaagtgctagcggaagtaaagataccggtgatgat
gtagtggtaaatttgaaaggcaataagaggagaaagaaaggcggaaagattgtacgggaa
gaagatgaccttgataagattctagcagaactcggtgtagcctcaccttcagcaagcgcg
gataataatgttctgattgatcaaactgaagcgaatgtggctgcaggtaatggagtggtg
agtgaaattgaagaaggcaattcagagatgtctgctgctgcaaaaaagaagagaaagaaa
aaagaaaggaaaaaagagaagaaggctgctgctgctgctgctgccgcctcttctgcagaa
gagaaacacgaagagataataaatcaagtagcaggagaggagaagaaagtctcgaaacat
gtcaagaatatgcaaaagagacttgcaaagataaaggctgaggcggagagaaaaaacagg
gaagaagaggagaggttaaagaaggaagaacaagagaggctagagcaagaaaaactggtg
agagaagcagaagagagaaagagattaaaaaaggagaaacgtttgaggaagaagcaagaa
ggtaaaattttaacaggcaaacagaaagaagaagcccgtcggctggaggcaatgaggaac
cagtttcttgccagtgctggaggtctacccctcactagtactgcactaaaacggcccgag
tatcagacaaagaagtcaaatccacattcgcaagaaaatgggtgtacctcgtctaacact
aatgaaatcacagaagcaaataaaaagcaggaagcgatgccctgtttggattctcttgaa
actgaggaggttgaagaaatgaacctaatggatgtgaagggggaacctgatgtggtggaa
gaggatgtaacggaggaagatgatgatgaagaatgggatgcaaagggtttggatgactat
gatcttgatattcttggtaagtacattgaatttgatgatgaacaaactgagttggagccc
aaatcggtcttaaataatggtataaaaagttcacctactgtcacttgctataccaaacca
tcaatgtttacagagaaggtgtcctcaactgcactagtggaattccaggataatattaaa
agcctgctaataggcgatgttgcagccgactctaaacagagagctatagcagagaaaaaa
gtttctcaaaaagcagatagtgaaaatctcaggtccccaatctgctgtattatgggtcat
gtcgatgctggaaagaccaagctgcttgattgtatccgtggaactaatgttcaggaaaat
gaagccggaggaattactcaacaaattggtgcaacatattttccggcagaaatcttgaag
gataagaccagggaattgaaacctgatgcagcacttaaagttccaggcttattgattatt
gatacccctggtcatgaatcgttcataaatttgcgctctcggggatctgggttatgtgat
attgcaattttagttgtggacataatggatggattaaaaccacaaactgtggaatcactc
aaactgttgaaaatgaggaagacaccgttcattgttgctttgaacaaggtggatagattg
tatggatggaaaacttgtcaaaacgcaccatttgtgaaggcaaagaatcaacagtgtaaa
gatgtccagaatgaatttaataagaggcttactgagattattggaaatttcaaggaacaa
ggatggaatagtgacctgtactataaaattaagaacaaagatatgggagagactatcagt
attgtacctacaagtgcaatcagtggtgaaggcatcccggatatgctactgttattagtg
aaatggtgtcagaagactatggttgataaacttacgtacagcgaaaaattgcagtgtaca
gttttagaggttaaagccagcgaaggtgatgggactacaattgatgtggtgttggttaat
ggcgtgcttcatgaaggtgatcagatagttgtctgtggtatgcagggaccgattgtgacg
acaatacgagcattatctactccccatccaatgaaggaactacgtgttaagggtacctat
cttcaccataaagaaattaaggctgcccagtttatcaagattgctgcacaggatcttaag
cacgcaatagcaggcaccaatatattcgtggtcgggcctgatgatgatttggaagtaatc
aaaaagttgactatgggagataagaagacagtcatggacagaactgataaaactggtaaa
gggatttgtgttcaagcgcctactctcggttccttggaagcattgcttgattttttgaaa
accccagaagtaaatatacctgtgggtggtataggcataggccctgtccacaagaaggat
gtcatgaaggccagagtaatgcttgagaagaagaagaaagagtacgcaaccatcttggct
tttgatgtcaaagtatcaccagacgcttgggaactcgcagataagtatggtgtaagaata
ttcattgctgataccatatactccttgatccatcagttcaaggcctaccttaatacccat
aaggaggaaaagaagaaggaagttgctgatgaaacagtatttccatgtgtgcttaagatt
ataccgggccgtgtgtttaacaagaaggatccaattattttaggtgttgatgttcttgag
ggaatcgccaaggttggaactccaatatgtatttcccagaaggaatttattgatatcggt
cggataactcacattagaaataacgagcagccagttgatcttgctaagaagggcagtgcg
gtgtccattaagataactggaagcaattcgcttgagaagcaaatgatgttcggcagacaa
ttcaatactgaagatctgcttgtcagccacttgtctgggaggtcgattgacatactgaag
gaactttattgggatgagctgtctgataatttgcggaagttggtcgtcaatctgaaaaag
ctgtttaaaatccagtga
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