Daucus carota (carrot): 108218976
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Entry
108218976 CDS
T05350
Name
(RefSeq) polygalacturonate 4-alpha-galacturonosyltransferase isoform X2
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00520
Amino sugar and nucleotide sugar metabolism
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
108218976
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dcr01003
]
108218976
Enzymes [BR:
dcr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
108218976
Glycosyltransferases [BR:
dcr01003
]
Polysaccharide
Structural polysaccharide
108218976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
DUF7279
Motif
Other DBs
NCBI-GeneID:
108218976
NCBI-ProteinID:
XP_017247665
LinkDB
All DBs
Position
4:20778573..20786027
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AA seq
677 aa
AA seq
DB search
MANKKGLHRNKGGGGGSGSRFPIAVVIFVSILAPLLFFVGRGIYATTATTSFDEQDVEDS
SMKQDLDWREKLALQNVKSLFSREVIDVIKANTNDLGPFSLDSFRKSNLSASWKFIRQEI
PVDQTASLNEAEAAKIVRETPKGKDAGHVQFVDTPAKLARRQLREKKREKRAADLVKQDD
EITVKLENDAFERSRSVDSAVLGKYNLWRKENEDGNSDSTVRLIRDQIIMARVYVSIATM
KNQTDLARELQNRLKESQHALRDASSDSDLGPSAPERIKSMGQVLSKAKDKLYDCKLVTG
KLRAMLQTADEQVRSLKKQSTFLSQLAAKTIPNGIHCLSMRLTIEYYLLSPEKREFPRSE
NLENPKLYHYALFSDNVLAASVVVNSAILNAKEPEKHVFHLVSDKLNFAAISMWFLLNPP
GKATIHVENVDEFKWLNSSYCPVLRQLESAAMKAYYFKSDHPTTAGSSNLKYRNPKYLSM
LNHLRFYLPQVYPKLDKILFLDDDIVVQKDLTGLWSVDLNGNVNGAVETCGESFHRFDKY
LNFSNPHIARNFDPNACGWAYGMNIFDLKEWKKKDITGIYHKWQTMNEDRVLWKLGTLPP
GLMTFYRLTHPLDKSWHVLGLGYSPTVDKTEIENAAVIHYNGNMKPWLELAMTKYRPYWT
KYIKVDHPFIRSCKLSE
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataagaaaggattgcacaggaacaaaggtggtggtggtggttccggatctagg
tttccgattgcggttgttattttcgtgtcgattttagcgcctttgctgttcttcgttggc
cggggaatttatgctactacagctaccacttcatttgatgagcaagatgttgaagacagt
tcaatgaagcaggatttggattggagagaaaagttggcactgcaaaatgtaaaatcgctc
ttctcaagggaggttattgatgtgatcaaagccaacacaaatgatttaggcccattcagt
cttgattcttttagaaaaagcaatctgtcggcttcgtggaagtttattaggcaagagatt
ccggttgaccaaactgcttccttgaatgaggccgaagctgcgaaaattgtacgggaaact
cctaaaggcaaagatgctggtcatgttcaatttgttgatacacctgctaaattagctaga
aggcaattaagagaaaagaaacgagaaaagcgtgccgctgatctggtaaaacaagatgat
gaaataactgtgaagcttgaaaatgatgcttttgaacgttccagatcagttgactcagca
gtcctgggtaagtataatctatggagaaaagagaatgaggatggcaattctgattcgact
gtaagattgattcgtgatcaaataattatggcaagggtgtatgtaagcattgcgacaatg
aagaaccaaactgatttggcccgtgaattacagaatcgactgaaagagagtcagcatgct
ctacgagatgcatcttctgattctgatctgggtcctagtgctcctgagagaataaaatcc
atgggccaagttctgtcaaaagctaaagataaattgtatgattgtaagcttgttactggg
aagctgagagcaatgcttcaaactgctgatgagcaagttcggagcctaaaaaagcagagc
acattcttgagtcagttggcagcaaaaacgattccaaatggtatccattgtctgtccatg
cgcctaactatagaatactacctcctttctccggaaaagagagaattccccagaagtgaa
aatctggagaacccaaaactttatcattatgcccttttttctgacaatgtattggctgct
tctgttgttgtcaactcggctatcctcaatgctaaggaaccagagaaacatgtatttcac
cttgtttctgataagttgaactttgcagctattagtatgtggtttcttttaaatcctccg
ggaaaagctaccatccatgttgaaaatgtagatgaatttaagtggctcaactcatcatac
tgtccagtcctgcgacaattagagtctgctgccatgaaagcatattattttaagtcggat
catcccaccactgctggttcatctaacctcaagtacaggaacccaaaatatttgtccatg
ctgaatcaccttaggttttatcttcctcaagtttatcctaagttggacaagatacttttc
cttgatgatgacattgttgttcagaaggatttgactggattgtggtcagtcgatcttaat
ggtaatgttaatggtgctgttgaaacttgtggcgagagctttcatcgttttgacaagtat
ctgaatttttcaaatccccatattgcaagaaattttgatcctaatgcatgtggttgggca
tatggtatgaacatctttgatctcaaggaatggaaaaagaaggatataactggcatatat
cacaagtggcagaccatgaatgaagatagggttctgtggaagcttgggacattacctcct
ggactgatgacgttttatcggcttactcatccacttgataagtcatggcatgtgcttggc
ctgggttatagtccgactgtagacaagacagagatcgagaatgccgctgttattcattac
aatggtaatatgaaaccatggttggaattagctatgacgaagtatcgaccttactggact
aagtatatcaaagttgaccatccatttatccgcagttgcaagttaagtgaataa
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