KEGG   Daucus carota (carrot): 108219022
Entry
108219022         CDS       T05350                                 
Name
(RefSeq) sorting nexin 1 isoform X1
  KO
K17917  sorting nexin-1/2
Organism
dcr  Daucus carota (carrot)
Pathway
dcr04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108219022
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dcr04131]
    108219022
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:dcr04990]
    108219022
Membrane trafficking [BR:dcr04131]
 Endocytosis
  Macropinocytosis
   Sorting nexins
    108219022
Domain-containing proteins not elsewhere classified [BR:dcr04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   108219022
SSDB
Motif
Pfam: PX Vps5 BAR_3_WASP_bdg Erp_C
Other DBs
NCBI-GeneID: 108219022
NCBI-ProteinID: XP_017247742
UniProt: A0A165YTP3
LinkDB
Position
4:45739726..45745952
AA seq 403 aa
MITTQRSIGGGGSTQSPRSPQSSQPYLSVSVTEPAKMGNGVQAYISYKVITKTNFPEYQG
AEKIVIRRYSDFVWLRDRLFEKFKGIFIPPLPEKSTVEKFRFSAEFIEMRRQALDIFVNR
IASHHELQQSEDLRIFLQADEQTMERARTQETGIFKKPSDFMQIFKDVQSKVSDVVLGKE
KPVEESNPEYEKLKNYIFELENHLAEAQKHAYRLVKRHRELGQSLSDFGKAVKLLGDCEG
EALGKAFSELGAKSEILAIKLQKEAHHLLMNFEEPLKDYVRAVQSIKGTMVERANAFRQQ
CELAETVKLKEIDLNKLRLMRSEKLLDAEHDYEELKTECEEATRKFENIVRLMSEEIVRF
QEQKTIDMGLAFHEFAKGQAHLANSIADAWRSLLPKLEACSSS
NT seq 1212 nt   +upstreamnt  +downstreamnt
atgatcaccacgcagaggagcataggaggagggggatctacacagagccctagatctcct
caatcatctcagccgtatttatcagtttcagttacggagcctgctaagatgggcaatggt
gttcaggcttatatctcctacaaggttatcaccaagacaaattttccagagtatcaaggc
gcagaaaaaatagttattcgaagatatagcgactttgtttggctacgcgatcgtcttttt
gagaagtttaagggaatctttattcctcctcttccagagaagagcactgtagaaaaattc
agatttagtgcggaatttatcgagatgaggcgtcaggcattggatatatttgttaacagg
attgcttcacatcacgagcttcagcaaagtgaggatctgagaatttttctgcaggcagat
gaacagacaatggagagagcacgaactcaggaaactggaattttcaaaaaaccttccgac
tttatgcagatattcaaggatgttcaatctaaagttagtgacgtcgttcttgggaaggaa
aagccagttgaagaatcaaatccagaatatgagaaactgaagaactacatttttgagctt
gagaatcatttagctgaagctcaaaagcatgcatatcgcttagtgaagagacaccgagag
ttggggcaatctctatcagatttcggaaaggctgtcaaacttctgggtgattgtgaaggt
gaggcacttggaaaggcattctctgaactaggggcaaaatcagagattttagcaatcaag
ctgcaaaaggaggctcaccatctcttgatgaactttgaagagcctttgaaagattatgta
cgcgctgtgcagtctattaagggaacgatggtggaaagagccaatgcatttaggcagcaa
tgtgaattggccgaaacagtgaaactaaaggaaatagatctcaacaagctcaggttgatg
cgatcagaaaagctgctagatgctgagcatgactacgaggagctcaagactgaatgtgag
gaagcaacaagaaaatttgagaatattgtgcggctgatgagtgaagagattgtgcgtttt
caagagcagaaaacaattgatatgggacttgcgttccatgaatttgccaagggacaggcc
cacctagctaatagtattgctgatgcctggcgaagtcttcttccgaagcttgaggcttgt
tcttcctcctag

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