Daucus carota (carrot): 108219022
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Entry
108219022 CDS
T05350
Name
(RefSeq) sorting nexin 1 isoform X1
KO
K17917
sorting nexin-1/2
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108219022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108219022
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
dcr04990
]
108219022
Membrane trafficking [BR:
dcr04131
]
Endocytosis
Macropinocytosis
Sorting nexins
108219022
Domain-containing proteins not elsewhere classified [BR:
dcr04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
108219022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
BAR_3_WASP_bdg
Erp_C
Motif
Other DBs
NCBI-GeneID:
108219022
NCBI-ProteinID:
XP_017247742
UniProt:
A0A165YTP3
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Position
4:45739726..45745952
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AA seq
403 aa
AA seq
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MITTQRSIGGGGSTQSPRSPQSSQPYLSVSVTEPAKMGNGVQAYISYKVITKTNFPEYQG
AEKIVIRRYSDFVWLRDRLFEKFKGIFIPPLPEKSTVEKFRFSAEFIEMRRQALDIFVNR
IASHHELQQSEDLRIFLQADEQTMERARTQETGIFKKPSDFMQIFKDVQSKVSDVVLGKE
KPVEESNPEYEKLKNYIFELENHLAEAQKHAYRLVKRHRELGQSLSDFGKAVKLLGDCEG
EALGKAFSELGAKSEILAIKLQKEAHHLLMNFEEPLKDYVRAVQSIKGTMVERANAFRQQ
CELAETVKLKEIDLNKLRLMRSEKLLDAEHDYEELKTECEEATRKFENIVRLMSEEIVRF
QEQKTIDMGLAFHEFAKGQAHLANSIADAWRSLLPKLEACSSS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccacgcagaggagcataggaggagggggatctacacagagccctagatctcct
caatcatctcagccgtatttatcagtttcagttacggagcctgctaagatgggcaatggt
gttcaggcttatatctcctacaaggttatcaccaagacaaattttccagagtatcaaggc
gcagaaaaaatagttattcgaagatatagcgactttgtttggctacgcgatcgtcttttt
gagaagtttaagggaatctttattcctcctcttccagagaagagcactgtagaaaaattc
agatttagtgcggaatttatcgagatgaggcgtcaggcattggatatatttgttaacagg
attgcttcacatcacgagcttcagcaaagtgaggatctgagaatttttctgcaggcagat
gaacagacaatggagagagcacgaactcaggaaactggaattttcaaaaaaccttccgac
tttatgcagatattcaaggatgttcaatctaaagttagtgacgtcgttcttgggaaggaa
aagccagttgaagaatcaaatccagaatatgagaaactgaagaactacatttttgagctt
gagaatcatttagctgaagctcaaaagcatgcatatcgcttagtgaagagacaccgagag
ttggggcaatctctatcagatttcggaaaggctgtcaaacttctgggtgattgtgaaggt
gaggcacttggaaaggcattctctgaactaggggcaaaatcagagattttagcaatcaag
ctgcaaaaggaggctcaccatctcttgatgaactttgaagagcctttgaaagattatgta
cgcgctgtgcagtctattaagggaacgatggtggaaagagccaatgcatttaggcagcaa
tgtgaattggccgaaacagtgaaactaaaggaaatagatctcaacaagctcaggttgatg
cgatcagaaaagctgctagatgctgagcatgactacgaggagctcaagactgaatgtgag
gaagcaacaagaaaatttgagaatattgtgcggctgatgagtgaagagattgtgcgtttt
caagagcagaaaacaattgatatgggacttgcgttccatgaatttgccaagggacaggcc
cacctagctaatagtattgctgatgcctggcgaagtcttcttccgaagcttgaggcttgt
tcttcctcctag
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