Daucus carota (carrot): 108219026
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Entry
108219026 CDS
T05350
Name
(RefSeq) PHD finger protein At1g33420 isoform X1
KO
K26271
PHD finger protein MS1/MMD1
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcr03000
]
108219026
Transcription factors [BR:
dcr03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
108219026
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GFIT
Motif
Pfam:
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
108219026
NCBI-ProteinID:
XP_017247747
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All DBs
Position
4:47438309..47443056
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AA seq
704 aa
AA seq
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MVVNGRPLKRMKRRVTADVNDFFTFPSGESPVDGPFRNSVKAFVSKYALLPPPSSLLPQL
MTRQIVFRVGDSAESNSDGDDLATVCLDVVEENVARSRSVYCDQCRVVGWSGNPVCAKRY
HFIIKADGSSIGGYNKPCSSCGDSFPGSDLSYRCKSCSHEMTAEDAEDWMYNQLEDTTHL
LHAVVHTNGYGHLLRVNGREGGSRVLSGCHIMDFWDRLCKVLAVRKVSVMDVSKKYGLEF
RLLHAITKGHPWYGDWGYEFGAGSFGLTVDAYNMAVETLSNTPLSIFTSQGRKPRTRLQD
LISIYQSISEDELVNIRDLFCFLMNLIRAAHTSPVRVDDATFKKRKLCDSRILSAWTDND
IFRVEKAMFKVMRAISGSSWVPWRALRGAVCKAGPPELLDYCLKELKGKHAANGMVVNSR
CNPESGALEYRLERVSVSENESSNSICHYPSGTNHPAESNLLHDLRYLYEAMLHPLTMLS
FVPEIKLSRSIESARKLLDCKQFVKNYHPEKFFTVMHPSAVQLSCEVDLVDLAEDDAIKP
PPEVIILPCIATISDVKIEGAKAFQEVYLSLRRFQAEEIIGYGGVPESTQVKLLFGSTET
VRIRGKCQGKNGSSKFRMERGVESWIVDCICGARDDDGERMLACDVCGVWQHTRCSGIPD
HEAVPAKYVCRVCSDRATKAKGDMVDLAYGSANGKIRVNWTTKA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtgaatggccggccgttgaagcgaatgaagcggcgagtcacagccgacgtgaac
gacttcttcaccttcccgtccggcgagtcgccggtggacgggccgttccggaacagcgtg
aaggcgttcgtctcgaagtacgcgctgctcccgccgccgtcgtcgctgttgccgcaactc
atgacgcgccagatcgtgttccgagtcggcgactcggccgagtcgaactcggacggggat
gatctagccactgtttgtcttgacgtcgtcgaggagaacgtggcgagatctagatccgtg
tattgcgatcagtgccgagtcgttggttggagcggcaatccagtatgtgccaagagatac
cattttatcatcaaggcagatggtagctcaattggaggctataacaagccgtgttcgagc
tgcggtgacagcttcccggggtccgacttaagttacaggtgcaagtcttgtagccatgag
atgaccgctgaagatgcagaagattggatgtataatcagctggaggatacaactcatctc
ttacatgctgttgtccataccaatggttatggccaccttcttagagttaatggtagagaa
ggtggatctagggtgctctctggatgtcatattatggacttttgggatcgcttgtgtaaa
gtacttgcagtcagaaaggtcagtgttatggatgtctcgaaaaagtatgggttggaattc
cgccttctacatgccatcactaagggccatccctggtatggtgactggggttatgagttt
ggtgctggtagttttggcctaacagttgatgcttacaatatggcagttgaaaccctctca
aatacgccgctctccatatttacttcccagggaaggaaaccaaggactagattacaggat
ttgatatcaatatatcagtcaatatcagaggacgagcttgtaaatattagagatctcttt
tgttttctgatgaatttgatacgggctgcacatacttctcctgtgagggttgatgatgcc
acctttaagaagcgtaagttatgcgactcgaggattctgagtgcatggactgataatgat
atttttagagtggaaaaagcaatgttcaaagtgatgagggctatttctggatcctcttgg
gtcccttggcgtgcgcttaggggagctgtttgcaaggcaggccctcctgaactactggat
tattgcctcaaggaacttaaaggaaaacatgcggcgaatggaatggttgtcaattcgcgg
tgtaatccagaatctggtgctttggagtacaggcttgagcgagtaagtgtctctgagaat
gaaagctcaaactcaatttgtcactatccttcaggtacaaaccacccagccgaatcaaat
ctcctccatgaccttaggtacctgtacgaggccatgcttcaccccctaacaatgttgagc
tttgtgcctgaaatcaaattgagtcgttcaattgaatctgctagaaagctgctcgattgc
aagcaatttgtaaagaattaccatcctgagaaattttttacagttatgcatccatctgct
gttcagttatcatgtgaagtagatctcgtggacctggccgaggatgatgctattaagccg
cctcctgaagtaattatactaccttgtattgctaccatttctgatgtaaagatagaaggt
gcaaaagcatttcaagaagtgtatctgtcgttgagaagatttcaagcagaagagataatt
ggctatggcggtgtacctgagtccacccaggtcaaacttctatttggttcaactgaaacg
gttagaatccgtgggaaatgccagggtaaaaatgggtcgtctaagttcagaatggaaaga
ggggttgagagctggatagtggattgtatctgcggtgcaagagatgatgatggagagaga
atgttggcttgtgatgtctgtggtgtttggcagcacactagatgttccggcattccagat
catgaagctgttcctgcaaaatatgtctgtcgtgtgtgctctgaccgagcgacaaaagcc
aagggtgacatggtcgaccttgcttatggaagtgctaacggcaagattagggtgaattgg
acaactaaagcttga
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