Daucus carota (carrot): 108219051
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Entry
108219051 CDS
T05350
Name
(RefSeq) ubiquitin domain-containing protein DSK2a isoform X1
KO
K04523
ubiquilin
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108219051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108219051
03051 Proteasome [BR:
dcr03051
]
108219051
Membrane trafficking [BR:
dcr04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
108219051
Proteasome [BR:
dcr03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
108219051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
XPC-binding
Dsc3_N
Rad60-SLD_2
RPN13_C
UBA_NBR1_C
Ubiquitin_5
Ubiquitin_2
UBA_HOIP
Motif
Other DBs
NCBI-GeneID:
108219051
NCBI-ProteinID:
XP_017247787
UniProt:
A0A165A625
LinkDB
All DBs
Position
4:25220356..25226649
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AA seq
566 aa
AA seq
DB search
MGEESESTQSLPLGAAAADDAVSINVRCSNGSKFSVRASVGSTVSQFKQVVAENCDVPAV
QQRLIYKGRILKDDQTLDSYGLQADHTVHMVRGSPPIASPPGAAASSVGNPNATTNATQP
VNPIDGGGLGGAGLGASLLNGLGGFGGLGLGAGSGTGAQGLFGAGLPEFEQVQQQLAQNP
NMMQDMMNTPAIQNLMNNPEIMRSLIMSNPQMRDIIDRNPELAHVLNDPGILRQTLEAAR
NPELMREMMRNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMGAGAGNDLGSNPFA
ALLGNQGGGNQGTNASSDTLNTGSEAAAGTTIPNSNPLPNPWGGTAGSQTNTAARSNPTG
DARGAGIGGLGGLGLPGLDQMGGVPDPSAMNQLLQNPGVSQMMQSLLSNPQYMNQFLGTN
PQLQSMFDMNPQLREMMQNPEIIRQLTSPEMMQRMSTFHQALLSQQNRPQTTQEPAQTGG
TTGAGAQNNMGLDMLMNMFSGLGGLGAGGLNVPNTSNVPPEELYATQLSQLQEMGFFDTQ
ENIRALRATSGNVHAAVERLLGNLGQ
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaggagagcgagtcaactcagtcgcttcccctcggcgccgccgcagccgacgac
gccgtttccatcaacgtccgctgctccaacggctccaagtttagtgtccgagcgagtgtg
ggatccactgtgtcgcagttcaaacaagtcgtcgcggagaattgcgatgttccagctgtg
cagcagcggctgatttacaagggacggatcttaaaggatgatcaaaccctagatagttat
ggtcttcaagctgaccacaccgtgcacatggttcggggttctccccctattgcatcgcca
ccaggtgctgcagcttcgagtgttggaaatccaaatgccactaccaatgctacccagcct
gttaatcctattgatggagggggtttaggaggtgctggtcttggggcatcactgttaaac
ggtcttggtggttttggtgggcttggcttaggtgcaggcagtggtactggtgctcagggc
ttatttggagctggacttccagagtttgaacaagttcaacagcaacttgctcaaaatccc
aacatgatgcaggatatgatgaatacaccagccattcagaacttaatgaataacccagag
ataatgcgcagcttgattatgagcaacccccaaatgcgtgatatcattgatcggaacccg
gaacttgcgcatgttcttaatgatcctggcattcttaggcagacattggaggctgctaga
aaccctgaactcatgcgtgagatgatgcgcaatactgatagggcaatgagtaacattgaa
tcatctcctgagggttttaacatgcttaggcgcatgtacgaaaatgttcaggaacctttc
ctgaatgctacaacaatgggtgcaggggctggaaacgatttaggatcaaatccatttgcc
gcgcttctaggaaatcagggtggtggtaaccaaggcacaaatgcctctagcgacactttg
aacaccggttctgaagcagctgcagggactactattcctaacagcaatcctcttcctaac
ccttggggtggtactgctggttcccaaacaaatactgctgcaaggtcaaatccaacagga
gatgcaaggggagcaggaattggtggtctgggaggacttggtctcccagggttggatcaa
atgggcggtgttccggatccatcagcgatgaaccaacttctgcaaaatccaggtgtttca
cagatgatgcagagtctgctttcaaacccacaatacatgaatcagtttcttggaactaat
cctcaactccagagtatgtttgacatgaaccctcaattaagagaaatgatgcagaatcca
gaaatcattcgtcagcttacgtctccagaaatgatgcagcggatgtcgacatttcatcag
gcacttctttctcagcagaacagaccacaaacaactcaggaaccagctcaaactggtggg
actacaggtgcaggagcacaaaacaacatgggactggatatgttgatgaatatgtttagt
ggacttggtggacttggagctggtggcttgaatgtcccaaacacttccaatgtgcctcca
gaagaactctatgctactcaactttcgcaacttcaagaaatgggtttctttgatacccaa
gagaatatcagggcattgcgtgctacctcagggaatgtgcatgcagcagtggagagactt
ttaggcaacctcgggcagtag
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