Daucus carota (carrot): 108219089
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Entry
108219089 CDS
T05350
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8
KO
K21343
ubiquitin carboxyl-terminal hydrolase 15 [EC:
3.4.19.12
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dcr01002
]
108219089
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108219089
04121 Ubiquitin system [BR:
dcr04121
]
108219089
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108219089
Peptidases and inhibitors [BR:
dcr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108219089
Membrane trafficking [BR:
dcr04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
108219089
Ubiquitin system [BR:
dcr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108219089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
108219089
NCBI-ProteinID:
XP_017247841
LinkDB
All DBs
Position
4:complement(45452011..45459078)
Genome browser
AA seq
917 aa
AA seq
DB search
MNRRLNRFIKTLIFSLFHSLSLLKALLSENLIQSLSLHSMLFDYDNEYDDGFSTPLATPF
TLPNDEPQLYLVNDRWWNEARGAVLSSDITGVSYLTTSMFSKVDDFWEVNEHSSEISMKM
MREETEGGGEGVLCEYALLLDWMFLRALKWHNDLNKGETILSAQDTMQDPFSLKIRYFLG
KMNILDAKISRKENEAGTFERACNIFCVDDDGQFRIRDFSGQITQFSVNDRNIPDSALQN
EGILLELQLYGLSHMTKGRHRVKDETVVDQFKGEDFFWTGSPKMNGSINISADIRVDCQP
SNSLYREARAMGLTGLLNLGNTCFMNSAVQCLVHTPKFVDYFLGDFKKDLNFENPLGMNG
KLALASGDLFRKLWTPGARPVAPSIFKSALSAFAPQFSGYNQQDAQEFLAFLLDGLHEDL
NRVKCKPYIEVKDADNIPDNEVADEHWRNHLARNDSIIVDVCQGQFRSKLVCPICKKVSI
TFDPFMYVSLPLPSTTMRTMTLTVLSTDGSCMPIPVTVTVPKFGKCEDLVKAVSVACSLR
DDETLLLAEVYGSQIMHFLDKPSDSIDLLRDSDQLVAYRLPKDSGDSSYLVVFMHQYEHT
PMYKYVDNWKKFGIPLLARMSDISKGSDIREQFLKLLSPFLMSVEDVFVEYDDAQTSGSE
DSRTKDGGSSVTINVYVNSEVEDGDVNSVVEDDLNVRDDFHFSLVEEHSLLAGTPIEMNE
PLPSPRSCRKYTVLVTWPNKMMNLYDTARLISLPEICKSSLFTKRPQESVSLYKCLDGFL
KEEPLGPEDMWYCPKCKEHRQASKKLDLWRLPEILVIHLKRFSYNRFSKSKLGTFVDFPV
EDLDLTHYIVHRTSEVSERYSLYAIVNHYGSLSGGHYTAFVQHGQNQWYEFDDSHVSPVA
EEQIKTSAAYVLFYRRI
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtcgcctgaatcgattcatcaaaaccctaattttctctctcttccattcactc
tctctcctcaaagcccttctctctgaaaacttaattcagtctctctctcttcattccatg
ttgttcgattacgacaacgagtacgacgacggttttagcactcctctcgcaaccccattc
actctccccaatgatgaaccccaactctatctcgtcaatgacaggtggtggaatgaggca
cgaggggcggtgttatcgagtgatatcacaggcgtttcttatctcaccacttcgatgttt
tcgaaagtggatgatttctgggaggttaatgaacatagctctgaaatttcgatgaaaatg
atgagggaagagacggaaggtgggggagaaggcgtgttgtgtgaatacgctttgcttttg
gattggatgtttctgcgggctcttaaatggcataatgatttgaacaagggtgaaactatt
ctttctgctcaagataccatgcaggatccattttctctgaaaatacgttattttttgggg
aagatgaatattttggatgcaaaaattagcagaaaggagaatgaagctggcacgtttgaa
agagcatgcaatattttctgtgttgacgatgatggccagtttcgcatacgggacttctca
ggacagataactcagttcagcgtaaatgacagaaatataccagattcagctctacagaat
gaagggattcttctagaattgcaattatatgggctctctcatatgacgaaaggaagacac
cgtgtgaaggatgagacagtagtagatcaatttaagggcgaagatttcttttggactggt
tcgcctaaaatgaatggaagcattaatattagtgcagatataagagttgactgccaacca
tctaatagtctgtatcgagaagctcgtgcaatgggactgacggggttgttgaatcttggg
aatacgtgttttatgaacagtgctgtccagtgtttagtgcataccccaaagtttgttgat
tatttccttggagattttaaaaaagatttaaattttgaaaatcccttgggcatgaatggt
aagcttgctttagcatctggggatttgtttagaaaactatggactccgggagcaagaccg
gtggctccaagtatctttaaatccgcactttccgcttttgcacctcaattcagtggctac
aaccagcaagatgctcaagagttccttgcttttttgttggatggactgcatgaagacctc
aatcgagtcaaatgcaagccatatattgaagtaaaagatgcagataatattcctgacaat
gaagtagcagatgaacactggcggaatcatcttgctcgtaatgattcgatcatcgttgat
gtgtgccaaggccaatttcgatcgaaattagtttgccctatctgcaagaaggtgtcaatt
acgtttgatccttttatgtatgtatcgttgccactgccttcaacaacaatgcggactatg
actttgacagtcctgagcactgatgggagttgtatgcccatcccagttactgtaactgta
cctaagtttggaaagtgtgaggatcttgttaaggctgttagtgttgcatgctctttacgt
gatgatgaaacactactgctggcagaggtatatggaagtcaaattatgcattttttggac
aaaccatctgattcaattgacctgcttagagattctgatcaactcgtggcttatcggttg
ccaaaagatagtggtgattcatcttatttggttgtgttcatgcatcagtatgaacatacg
ccaatgtataaatatgtggacaattggaagaagttcggcattcctttattagcaagaatg
tctgatatttctaaaggatctgatatccgtgaacagtttctaaagttacttagtccattt
ctaatgtcagtggaggatgtttttgtggagtatgacgatgctcagaccagtggtagtgaa
gactctaggacgaaggatggtggcagcagtgttacgataaatgtctatgtgaatagtgaa
gtagaggatggtgatgtcaatagtgtagttgaagatgacttaaatgtgagggatgatttc
catttttctttagtagaagaacacagtttactagcgggtaccccaatagagatgaatgag
ccattaccatccccaagatcctgcaggaaatatacagtgcttgttacgtggccaaataag
atgatgaatttgtatgacacagctcgcttgatctcattgccagagatatgtaaatcttca
ttattcactaaaaggcctcaagaatctgtttctctctataaatgcttggacgggttctta
aaagaggagcctttaggacccgaggacatgtggtactgtcctaagtgcaaggagcatcgc
caggccagcaaaaaattggatctttggagactgccagagattttggttattcatctaaag
cggttttcatataacaggttttctaagagtaagctgggaacttttgtggactttccagtt
gaggacttggatctcacacattacattgttcacagaactagtgaggtttcagaacgatat
tcattatatgcgattgttaaccactatggcagcctgagcgggggtcattatactgcattt
gtccaacatggacaaaaccagtggtatgaatttgacgacagccatgtttcccctgtagcc
gaggaacaaataaagacttcagctgcttatgttcttttctataggagaatctga
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