Daucus carota (carrot): 108219107
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Entry
108219107 CDS
T05350
Name
(RefSeq) probable galacturonosyltransferase 7 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00520
Amino sugar and nucleotide sugar metabolism
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
108219107
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dcr01003
]
108219107
Enzymes [BR:
dcr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
108219107
Glycosyltransferases [BR:
dcr01003
]
Polysaccharide
Structural polysaccharide
108219107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
108219107
NCBI-ProteinID:
XP_017247878
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All DBs
Position
4:complement(29355584..29362001)
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AA seq
622 aa
AA seq
DB search
MKGGGGGASSYTLPRRWRGPVIAVLALVFLSMLVPLVFMLGLFKSFHSSVFDSDSRPLES
KRLRVYDQHVEVTTKNYSQQAETKYVDQQVRVTVPTLPKDFTSNPGKEVENKTNSFTVLT
NTSYSRPETNILRQSGRNEVAKNSEGTTESEQLCALKYGSYCLWRIEHKEKVKDLVVKRM
KDQLYVARAYYPSIAKLPALDKLSLEMKQNIQEYERVLSETSTDVDLPSHMKKKLQNMDD
VIARAKSYPVDCNNVDKKFRQLVDLTEDEANFHAKQSAFLYQLAVLTMPKSLHCLSMRLT
VEYFKSPSLYMEQSLSEKYMNPDLQHYVIFSNNILASSVVVNSTVMHAKESGNQVFHVLT
DKQNYFAMKVWFFSNTFREATVQVLNIEDLEINTQEKGSLLQLSLPEEFRISFHDASKPS
KSQIVTDYMSLFSNSHYVLPKIFHTLKKVVVLDDDLVVQRDLSALWSLDMDGKVISALQF
CSLRLGQINYNFGKNFDGNTCAWLSGFNVIDLVRWRDQAVTETYKRLVQELDRDRGRFKT
ATVFSSLLTFQGMVHTLDDDWVLPGLGHTYSLAPETVRNAAVLHFNGNRKPWLELGIQKY
KTFWRTYLNREHRFLSDCNVNP
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaggcggtggcggagcgtcatcgtacacgcttccgaggcgatggagaggacct
gtcattgcggtgctggcgctcgtcttcctctcgatgctcgtgcctttagtgttcatgctc
ggtctcttcaaatcttttcattcttcagtttttgattccgattcacggcctttagaatca
aagcggcttagagtttatgatcagcatgtcgaagttactactaagaactactctcagcag
gcggaaacaaaatatgtagatcaacaagtgagagtaacggtgccaacacttcccaaggat
tttacaagcaaccctggcaaggaagttgagaataaaaccaacagtttcacagtgttgact
aatacatcatattcacgtcctgaaacaaatattttaagacaaagtggtagaaatgaagtt
gccaaaaattcggaaggaactactgagagcgaacaattatgtgcattaaaatacggtagt
tactgtctatggcggatagaacacaaggagaaagtaaaagatcttgttgtgaagagaatg
aaggaccagctatacgtggcgagagcttactatccaagtattgcaaaacttccagctctt
gacaagctctctcttgaaatgaaacaaaatattcaagaatacgagcgtgttctgagtgaa
acatcgacagatgttgatcttccatctcatatgaaaaagaaacttcagaatatggatgat
gtaatagctagagcaaaatcatatccggtggattgcaataacgttgacaagaagttcagg
caactagttgatcttactgaggatgaagccaactttcatgcaaagcagagtgctttcctt
taccaacttgctgtcctaacaatgcccaaaagtctccactgtttgtcaatgcgattaact
gttgagtattttaaatctccttcactttatatggaacagtcactctcggaaaaatatatg
aacccagatctgcagcactatgtcatattctccaataacatacttgcatcttctgttgtg
gtcaactcaactgtaatgcacgcaaaggaaagcgggaatcaagtttttcatgtgctgact
gataaacagaattattttgccatgaaagtttggttctttagtaatacattccgggaagct
acagtacaggttcttaatattgaagatcttgaaataaacacccaagagaagggatccctt
ttgcagttatcattacctgaagaattccgtatatctttccatgatgccagtaaaccatcc
aagagccaaatcgttacagactacatgtctcttttttcaaattcccactatgtgcttcca
aagatatttcacactttaaaaaaagttgtggttttggatgatgatctagttgttcaacgt
gatttatctgccctatggagccttgacatggatggaaaagttattagtgcacttcagttc
tgcagtttgaggctgggtcagataaattacaattttggaaagaactttgacggaaatact
tgtgcgtggttgtctggattcaatgttattgatctagtcaggtggagagatcaagctgtt
accgaaacctataagcgattggtgcaagagcttgacagggatagaggacgttttaaaact
gctacagtgttttcaagcttgcttacctttcaaggaatggttcataccctagatgatgac
tgggtcttaccaggactgggtcatacatatagtctggctcctgaaactgttagaaatgcg
gcagtgttgcactttaatgggaacaggaagccctggcttgagcttggcattcaaaaatat
aaaaccttctggaggacatatttgaatcgagaacatcgtttcttgagtgactgcaatgtg
aacccgtaa
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