Daucus carota (carrot): 108219193
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Entry
108219193 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108219193 isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108219193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108219193
03012 Translation factors [BR:
dcr03012
]
108219193
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108219193
Translation factors [BR:
dcr03012
]
Eukaryotic type
Release factors
108219193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
G-alpha
Motif
Other DBs
NCBI-GeneID:
108219193
NCBI-ProteinID:
XP_017247989
UniProt:
A0A162A9H7
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Position
4:30756006..30770614
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AA seq
543 aa
AA seq
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MDNIQDDIRALQLDSSAEDKNLVANGEELMADEVEKSDRMDEAEDRNVMANGEDLMADDV
EKPDRMDEDSRDEVQGDSQLPHVEPRNTGEVVEEVSALDKTENDTEVAKKRHLNVVFIGH
VDAGKSTIGGQILFLSGQVDERTIQKYEREAKDKSRESWYMAYIMDTNEEERVKGITVEV
GRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYEKGGQTRE
HVQLAKTLGVTKLLVVVNKMDDPTVNWSIDRYNEIESKMTPFLKSSGYNVKKDVQFLPIS
GLHGSNLQTRVDKSVCSWWKGACLFEALDAIDVPPRDPKAPFRLPIIDKFKDMGTVVMGK
AESGSVSEGDSLMVMPNKAHVKVLAVYCDEDKVRRAGPGENLRVRLSGIEEEVILSGFVL
CSVARPIPVVTSFVAQLQFLEVLDNAIYTAGYKAVLHIHSVVEECEIVELMKQIDLKTKK
PMKKKVLFVKNGAIVLCRIEVNNLICIEKFADFPQLGRFTLRTEGKTVAIGKVTELPSSS
SSS
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggataatatccaagacgatatccgagcgttgcagcttgattcatctgcagaagataag
aatttggtggctaatggagaagaattgatggctgatgaagttgaaaaatctgatagaatg
gacgaagcagaagataggaatgtgatggctaatggggaagatttgatggctgatgacgtt
gaaaaacctgatagaatggacgaagactcaagggatgaggtgcaaggagactcgcaacta
ccgcatgtggagccaagaaatactggtgaagtggtagaagaagtttctgctctcgataaa
actgaaaacgatactgaagttgctaagaaaagacatttgaatgtggtgtttattggtcat
gtcgatgctggaaaatccacaattggtggtcaaatactattccttagtgggcaggttgat
gagcgtacaatccagaagtacgagagagaagcaaaggataaaagcagagagagctggtat
atggcctacatcatggataccaatgaagaagaaagagtcaagggaataacagttgaagtt
ggcagagcacactttgaaaccgaaacaacaagatttactattcttgatgcaccgggtcac
aaaagttatgtaccaaatatgattagtggtgcatctcaagctgacatcggtgtgctggtg
atatctgctcggaaaggagaatttgaaacaggatatgagaaaggtgggcagactcgtgaa
catgtccagcttgcaaagactctgggtgtcactaaactcctcgtcgttgtcaataagatg
gatgatcctacagtgaactggtcaatagataggtataacgaaattgagtcaaaaatgaca
ccattcttgaagtcttctggttacaatgtgaagaaagatgtgcagtttctaccaatttcc
gggcttcatggttcaaatttgcagacaagagtggacaaatctgtttgttcatggtggaag
ggtgcatgcctcttcgaagcccttgatgcaattgatgttcctcctcgtgatccaaaggcc
ccattcaggttgcccattattgacaagtttaaagacatgggtactgttgttatgggcaaa
gcagaatctggtagcgtgagtgagggtgatagcttgatggtcatgccaaacaaggctcat
gtgaaagttcttgctgtatattgtgatgaagataaagttaggcgtgctggacctggtgaa
aacttgcgtgtcagattatctgggatcgaggaagaggttatattgtctggtttcgtcctt
tgtagtgtagctaggccaattcctgttgtcacttcttttgttgcccagttacaattcctt
gaggttctggacaatgcaatttacactgctggctacaaggcagtattgcatattcactct
gttgtagaagaatgtgagattgtcgagctaatgaagcagattgatttgaagactaagaaa
cctatgaaaaagaaagtactatttgtgaagaatggggctattgttttgtgccggattgag
gtgaacaatttgatatgcattgagaagtttgcagattttccgcaactaggacggttcact
ctccgcactgaaggaaaaactgttgcgatcgggaaagtaaccgagcttccttcatcgagt
agtagctcataa
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