KEGG   Daucus carota (carrot): 108219265
Entry
108219265         CDS       T05350                                 
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
dcr  Daucus carota (carrot)
Pathway
dcr04144  Endocytosis
dcr04517  IgSF CAM signaling
dcr05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    108219265
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108219265
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    108219265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dcr04131]
    108219265
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:dcr04812]
    108219265
Membrane trafficking [BR:dcr04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    108219265
Cytoskeleton proteins [BR:dcr04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     108219265
SSDB
Motif
Pfam: Beta-prop_EML_2 Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR3_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd Tricorn_2nd Beta-prop_WDR35_TULP_N WDR55 Beta-prop_IFT140_1st WD40_Gbeta EIF3I Beta-prop_WDR3_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd PD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st RMC1_N Beta-prop_EML Beta-prop_WDR90_POC16_2nd B-prop_COPA_B_2nd Beta-prop_WDR36-Utp21_2nd eIF2A
Other DBs
NCBI-GeneID: 108219265
NCBI-ProteinID: XP_017248108
UniProt: A0A165YGM5
LinkDB
Position
4:complement(44546664..44557947)
AA seq 378 aa
MAATAAHQFAQCTTCHAWSPDHSMIAFCPNSNEVHIYRLLQEKWEKMHVLQKHDQIVSGI
DWSISSNRIVTVSHDRNSYVWNQEGADWVPTLVILRINRAALCVQWSPRGNKFAVGSGAK
TVCICYYEQENNWWVSKLIRKKHDSSVTSVAWHPNNILLATTSTDAKCRIFSTFIKGVDK
RSSGAGSSSDAKFGEQIVQLDLSFGWAFGVKWSPSGKTLAYTGHNSVIHFVDDIGPSPSA
QTVAFRDLPLRDVLFVSERMVIGVGYDCNPMVFAADERGIWSFIRFLTERKTASAGVKYG
SQLSGAFGKLYGQSKYSTGNDTVQVSIPDGNVHENCINCIMPLNKAKDSTTMRFSTSGMD
GKVVIWDLDNQLDLHEYI
NT seq 1137 nt   +upstreamnt  +downstreamnt
atggcggcaacagcagctcatcagttcgctcagtgcactacttgtcacgcttggagccct
gatcattccatgattgcgttctgcccaaacagtaatgaagtacacatctatagattatta
caagaaaagtgggagaagatgcatgttcttcaaaagcacgatcaaattgtttctgggata
gattggagcatatcatccaacagaatcgtcactgtatctcatgataggaattcatatgtg
tggaaccaggaaggggcagattgggttcccactcttgttatattaaggataaaccgtgct
gcactttgtgttcagtggagtcccagagggaacaaatttgctgttggaagtggtgccaaa
actgtttgcatatgctactacgagcaagaaaataactggtgggtcagcaagcttataagg
aaaaaacacgactcttctgtgacaagcgttgcttggcatcctaataatattttactagct
actacatctactgatgcaaagtgccgaatattttccactttcataaagggtgttgataag
aggagttcaggagcagggtcttcatcggatgcaaaatttggcgagcaaattgttcaactt
gatctttcatttggctgggcatttggtgtcaaatggtcaccaagtggcaaaaccttagct
tatactggtcataattccgttatccactttgtggatgacattggtccttccccttctgcc
caaaccgtagcattccgtgatttaccacttcgtgatgtattatttgtttctgagagaatg
gtcattggtgttggatacgattgcaatccaatggtatttgcggcagatgagagaggaata
tggagcttcatcaggttccttactgaaaggaaaacagcatctgctggtgttaaatatggt
tcacagctgtcaggagcatttgggaaactgtatggacaatcgaaatacagcaccggcaat
gatactgtccaagtttctattcccgatggaaatgtccatgaaaactgtatcaattgtatt
atgccactcaataaagctaaggactctacaacaatgcgctttagcacctcagggatggat
ggaaaagttgtgatatgggatttggacaaccaactagatctgcatgagtatatatag

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