Daucus carota (carrot): 108219304
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Entry
108219304 CDS
T05350
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00906
Carotenoid biosynthesis
dcr01100
Metabolic pathways
dcr01110
Biosynthesis of secondary metabolites
Module
dcr_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
108219304
Enzymes [BR:
dcr01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
108219304
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
HI0933_like
Thi4
FAD_oxidored
GDI
GIDA
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
108219304
NCBI-ProteinID:
XP_017248162
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Position
4:complement(30016699..30021898)
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AA seq
615 aa
AA seq
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MSTSIFETPLPRSDLFLCSNSLVSQSFKLFDNSRSFGLKSLRPRCQKDRILYPKPLNFGF
CRVSRRKRKPTFVLNSVLSVDKELESDESVGLGRSREYDAIVIGSGIGGLVAATQLAVKG
AKVLVLEKYLIPGGSSGYYERDGFTFDVGSSVMFGFSDKGNLNLITQALAAVGCKMEVIP
DPSTVHFHLPSNLSVLVHREYNEFFSELTSKFPHEKEGIFKFYGECWKIFNALNSLELKS
LEEPIYLFGQFFKKPMECLTLAYYLPQNAGDIARKFIKDPEVLSFIDAECFIVSTVNALK
TPMINASMVLCDRHYGGINYPVGGVGGIAKSLAKGLVDQGSEIQYKANVKSIIVENGKAV
GVRLANGNEIFAKNIISNATRWDTFGKLLKQDELPKEEENFQKLYIKAPSFLSIHLGVKS
DVLPPDTDCHHFVLEDDWSNLEVPYGSIFLSIPTVLDSSLAPEGNHILHIFTTSSIEDWQ
GMSQKDYEKKKELVADEIISRLEKKLFPGLQSSIVLKEVGTPKTHRRYLARDSGTYGPMP
QGTPKGLLGMPFNTTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADLGLEQKSPIL
DAALLRLLGWFRTLA
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtctactagcatctttgaaaccccattaccaagaagtgatctttttttatgtagcaac
agtttagtttctcaaagttttaaactttttgataattccaggagttttgggttgaaaagc
ctaagacccagatgtcagaaagatagaattttgtatccaaagcccttgaattttgggttt
tgtagggtgagtaggagaaagaggaagcctacttttgtgttgaattctgtgctgagtgtt
gataaagagttggagagtgatgaaagtgtgggattgggtaggagtagagagtatgatgct
attgtgattgggtctgggattggtggtttggttgcagcaacacagttggctgtgaagggt
gctaaggttctagtgcttgaaaagtatttgattcctggtgggagctctggatattacgaa
agagatggttttacattcgatgttggatcatctgtgatgtttggcttcagtgataagggg
aatcttaacttgataactcaagcattggcggcagttggctgtaagatggaggtgatacct
gaccccagtactgtccattttcatctacctagtaatctttctgtcctagtacatagagaa
tataatgagttcttctccgaactgacaagcaaatttccacatgaaaaggaaggaatattt
aaattttatggtgaatgctggaagatttttaatgccttgaactcattggaactgaagtca
ctcgaggaaccaatctacctgtttgggcagttctttaaaaagcctatggaatgcctaaca
ctggcatactatttgcctcaaaatgctggagacatagctcggaagttcataaaagatccg
gaggttctgtcctttatagatgctgagtgctttattgtgagtaccgttaatgcgttgaag
acaccaatgatcaacgcaagcatggttctgtgtgacagacactatgggggaattaactat
cctgttggtggggttggtgggatcgcaaaatcattagcaaaaggattagtcgaccaggga
agcgaaatacaatacaaagcaaatgttaagagcattatagttgaaaatggaaaagccgta
ggagttcggctggcgaatggaaatgagatatttgctaagaacataatttcaaatgctacc
agatgggatacttttgggaagcttctaaaacaggatgaattacctaaagaagaagaaaat
tttcagaaactttacataaaggccccgtcatttctttctattcacttgggagttaaatct
gatgttttgcctccagatacggattgccaccattttgtgctcgaggatgattggtcaaat
ttagaggttccatatggtagtatattcctgagcattccgactgtccttgattcatcatta
gctccagaagggaatcatattcttcacatatttacaacttcttccatagaggactggcag
gggatgtctcaaaaagattatgagaagaagaaggagcttgtagctgacgagattataagc
cgactggaaaagaaactatttcctggtctccagtcttccattgttttaaaggaggtcggg
acacctaagacacacaggcgctaccttgctcgtgatagtggtacctatggacctatgcca
cagggtaccccaaagggtttactaggaatgccatttaatacaactgcaattgacggtttg
tactgtgtgggggatagttgctttccaggacaaggtgttatagccgttgcattctcagga
gtgatgtgtgctcatcgagttgctgctgatttagggcttgagcagaaatctcccattttg
gatgctgctctccttcgtctactgggttggttcaggacactagcataa
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