Daucus carota (carrot): 108219311
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Entry
108219311 CDS
T05350
Name
(RefSeq) structural maintenance of chromosomes protein 6B
KO
K22804
structural maintenance of chromosomes protein 6
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108219311
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
108219311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
DUF948
SbcC_Walker_B
AAA_29
AAA_21
Motif
Other DBs
NCBI-GeneID:
108219311
NCBI-ProteinID:
XP_017248168
UniProt:
A0AAF0WXY8
LinkDB
All DBs
Position
4:complement(36034465..36052822)
Genome browser
AA seq
1052 aa
AA seq
DB search
MGDSRVYSGADRAGIVSKIRLENFMCHSNLEIQLGDFINFVTGQNGSGKSAILTALCVAF
GCRARGTQRAASLKDFIKTGCSYALVQVELKNEGEDAFKPETYGDSIVIERRISESTSST
ILKDHQGKRVASRKEDLVDIVEHFNIDVENPCVIMSQDKSREFLHSGNAKDKFKFFFKAT
LLHHVADLLKSIEKQLIGAQELVGNLESSISPILKELSELQGKIKSMEQVEEISQRAQLL
KKKLAWAHVYDIDDQIQQQDARIEKLKGRIPYCQDLIERQTVKIEGLEDRLAKKKAQIAI
LMERTSEVRKMKEELQQKRSEATKKRSELEEDCSRRVNEIKRMMKKAQMLEQQIRDINDQ
DDKNTQAEEHEMEETLSGLRQEVEEAVMQFERCKKDEESLSNSIADADNDIRKLQSAIDD
LMKKDQQIRYTIRDLRSHQTNKVTAFGGDRVTNLLRAIERHHHRFGRPPIGPIGVHLKLV
GGDKWAYAVENAVGRLLNAFIVNDHKDNLVLRACAREANYNHLQIIIYDFSRPRLNIPDH
LLPQINHPTTISVLRSENATVMNVLIDVGHAERQVLVSDYSVGKSVAFDRNIQNLKEVYT
LEGYKMFSRRSAQTTLPPNRNVRTGRLCSSFDDQIKNLENDASHIQEEVRQAREKRKRLE
DGHHNLRDEFQLAKRRRTDVEGILRSKKFALQDTEKSYALESSSRPTSNVDELYQELSLA
KKEIQERESKLEEIQVSAAEAKIKASELKASFENLCESAKAEIHAFEKEEQDMMQIEEDL
HGAKAERNRFELAKNERVIPNIKEAELRKEDLENNRKVNYKKASIICLESEIQALGGNDG
STPEQLSAQLTRLNQRLQRESQNYPESIDDLRMMHDKKERKIFRKRQTYKMFRQKLHACQ
KSLELRYSKFQRNATLLKRQLTWQFNGHLRKKGISGQIKISYEDETLSIEVKMPQDASNN
TVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALA
QGSQWIFITPHDISMVKQDERIKKQQMAAPRS
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgggagattctagggtttatagcggtgccgatcgcgcaggcatcgtctctaaaatccgt
ttggagaatttcatgtgtcacagtaatctcgaaattcaattgggtgattttatcaatttc
gtcaccggacagaatgggagtgggaaaagtgctatacttactgcattatgtgttgcattt
ggttgtcgggcgagaggaacacagagggccgcgagtcttaaggattttataaagaccggt
tgtagttatgccttggttcaggtggaattaaaaaacgaaggggaggatgcctttaagcca
gaaacttatggcgacagcattgttatagagcgcaggatttctgaatcaacaagttcaact
attctaaaggatcaccaaggaaaaagggtggccagtcgaaaagaagaccttgtggatatc
gttgaacatttcaatattgatgtcgagaatccgtgtgtgataatgagtcaagataaaagt
agagaatttttacattctggaaacgcgaaggataaatttaagtttttcttcaaggcaaca
ttgctacatcatgtggctgatctattaaaaagtattgaaaaacaactgattggtgcacaa
gagctagttggaaatttggaaagttcaatcagccccatactgaaggaacttagtgagttg
caaggaaagattaaaagcatggaacaagtcgaagaaatttctcaaagggcacagctgtta
aagaagaaacttgcctgggcccatgtatatgacattgatgatcaaatccagcaacaagat
gcaaggattgaaaaacttaaaggtcggataccttattgtcaagacctaattgaacgacaa
actgtcaagattgagggtttggaagatcgcttggccaaaaagaaagctcaaattgctatt
ctgatggaaaggacatcagaggtcagaaagatgaaggaagaattgcaacaaaagcgatca
gaggctacaaaaaaaaggtccgagctagaagaagattgtagccgtagagttaacgagata
aaaaggatgatgaagaaggcacaaatgcttgagcaacaaattcgtgatataaatgaccag
gatgataagaatacacaggctgaagaacatgagatggaggaaaccctaagtgggcttagg
caggaggttgaagaagctgttatgcagtttgaaagatgtaaaaaagatgaggagtcttta
tccaatagcatagcagatgcagataatgatattcggaaactccagtccgcgattgatgat
ttaatgaagaaggatcaacaaatccgttataccatacgtgatctccgttcgcaccaaaca
aacaaggtaacggcttttggaggtgatagagtaactaaccttttaagggcaatagagaga
catcaccaccgatttggaaggccgccaatcggtccgataggggtccacctgaaattggtg
ggtggtgataagtgggcttatgccgtagaaaatgcagtaggaaggttgttgaacgctttt
atcgtgaatgatcataaagacaatcttgttctgagagcctgtgcaagggaagccaattac
aatcacctccagatcattatttatgatttctccagaccaaggctgaatattccagatcac
ctgcttcctcagataaatcatcctactacaatatctgttttacgttcagagaatgctact
gtgatgaatgtcctaattgatgtgggtcatgctgaaagacaagttcttgttagtgattac
agtgtgggtaaatctgttgctttcgacagaaatattcagaatttgaaggaggtttacact
ttagagggctataaaatgttctcccgtcgttcagcccagactactctcccaccaaatagg
aatgtacgaacaggccgcttatgtagttctttcgatgatcagattaaaaatcttgaaaat
gatgcgtcacatatacaagaggaagttcgacaagcaagggaaaagagaaagcgcttggag
gatgggcatcataatcttcgagatgaatttcaacttgcaaagaggcggcgtactgatgta
gaaggcatcctgaggtcaaagaaatttgctttgcaagacacagagaagtcatatgcatta
gaatctagttctcgaccaacatctaatgttgatgagctttatcaggagttatctcttgct
aaaaaggagattcaagaaagagaaagtaagttggaagagattcaagttagtgcggctgaa
gcaaaaatcaaagccagtgaactaaaagcatcatttgaaaatctctgtgaatcagcaaaa
gcagagattcatgcttttgagaaggaagaacaggacatgatgcagattgaagaagatctg
catggtgcaaaagcggaaaggaatcggtttgaacttgcaaagaatgagagggtaattcca
aatatcaaagaggcggaattaagaaaagaagatcttgaaaacaatcgcaaggtgaactac
aaaaaggcttctatcatttgtctggaaagtgagatccaggctttaggagggaatgatgga
agcactccagaacaactaagtgcacaattgactaggcttaatcaaagactgcagcgtgag
agccaaaattatccagaatctattgatgatcttagaatgatgcatgacaagaaagagcga
aagatttttagaaagcggcagacttacaaaatgtttcgtcagaaactacatgcatgccag
aaatccttagagttgcgatatagcaagtttcagaggaatgcaacacttttgaagcggcag
ttgacttggcaatttaacggacatttacgaaagaaagggatcagtggccagattaaaatt
agttatgaagatgaaaccctctcgatagaggttaagatgcctcaagatgcatcaaacaat
actgttcgagacactagagggctttcaggtggtgaacgttctttttctacgttatgcttt
gctctggcacttcatgaaatgacagaagctccatttcgtgcaatggatgaatttgatgtg
tttatggatgcagttagtagaaagattagtttagacacgctcgttgattttgcattggca
caaggatcacaatggatttttatcacccctcatgatataagcatggttaaacaagatgag
aggattaaaaaacagcaaatggcggctcctcgttcgtaa
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