Daucus carota (carrot): 108219348
Help
Entry
108219348 CDS
T05350
Name
(RefSeq) E3 ubiquitin-protein ligase RING1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108219348
04121 Ubiquitin system [BR:
dcr04121
]
108219348
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108219348
Membrane trafficking [BR:
dcr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108219348
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108219348
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-RING_16
Anti-TRAP
zf-HC5HC2H
Zf_IFT144_1st
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
108219348
NCBI-ProteinID:
XP_017248246
UniProt:
A0A165XXR0
LinkDB
All DBs
Position
4
Genome browser
AA seq
328 aa
AA seq
DB search
MFSGRSSTGGTNSSQQYFCYQCNRTVAISSPSASSELTCPNCNGGFLEEIENPNPNSDPN
PNPNPSPFFSFSSDNIAPFPSFTGGSPFMFSTNLGGDDPAELSSMFSGGADRFQSADEFN
PFAFLQNYLNTLRASGANIQFVVDGNNTSGNLSGANLGDYFIGPGLEQLIQQLAENDPNR
YGTPPAAKSAVEALPVVKISQEMLGCDFSECAVCKESFGLDEEARQMPCKHIYHSDCIMP
WLEMHNSCPVCRFELPTDDPEYENRARDGSGAGRVQESAETPRTMERRFRIQLPWQVMTS
GEGSNSRDASDNAGGSNSGGQAREEDLD
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgttttccggccgatcttccaccggcggcacaaactcatcacagcaatacttctgctac
caatgtaaccgcaccgtcgctatatcatctccctcggcttcttctgaactgacttgcccc
aattgtaacggtggctttctcgaagaaatcgaaaaccctaaccctaattccgatcctaat
cccaaccccaaccctagcccgttcttctccttctcctccgacaatatcgcgccgttcccg
tcgttcaccggcgggtcgccgttcatgttctcgaccaatctcggcggcgacgatccggcg
gaactgagtagtatgttttccggcggagccgatcggtttcaatcggcggacgagttcaat
ccgtttgcgtttctgcagaattatctcaatactcttcgggctagtggtgcgaatattcag
tttgttgtggatgggaacaatacgagtggcaatttgagtggagcgaatctcggtgactat
tttatcgggcctggacttgagcaactgattcagcagttagctgagaatgatccgaatcga
tacggaacgcctcctgctgctaagtcggccgtggaggcgcttcctgttgtcaaaattagt
caggagatgctggggtgtgatttttctgagtgcgcggtttgtaaagagagtttcggttta
gatgaggaggcgaggcagatgccatgtaagcatatctatcatagtgactgtattatgccg
tggttggagatgcataattcgtgtccggtgtgtaggtttgagttgcctaccgatgatcct
gaatatgagaatagggccagggatgggagtggagctgggagagtgcaggagagtgcagag
acaccgaggactatggagaggaggtttaggatccagttgccatggcaggttatgacatcg
ggggaagggagtaatagcagagatgcaagtgacaatgctggtggatctaactctggtggt
caagctagggaagaagatctcgactag
DBGET
integrated database retrieval system
