Daucus carota (carrot): 108219365
Help
Entry
108219365 CDS
T05350
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1 isoform X1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dcr01003
]
108219365
Enzymes [BR:
dcr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
108219365
Glycosyltransferases [BR:
dcr01003
]
Polysaccharide
Structural polysaccharide
108219365
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
108219365
NCBI-ProteinID:
XP_017248268
LinkDB
All DBs
Position
4
Genome browser
AA seq
544 aa
AA seq
DB search
MCKIEKRGYIEMGLKSFGGEGKKGIDKFKSSMVSRSKMKLWMIRATTCILLWTCLVQLTT
LSEMWGARVLKGWPSCFSHESATAMDVMITPSLPTRVLPPKRVYKNNGYLMVSCNGGLNQ
MRAAICDMVAIARYLNVTLIVPELDKTSFWADPRFARLCFLLTLETRHDFSMTKLYLYIS
YFIWHGSEFQDIFDVDHFISSLRDEVRILKQLPPRVKRRVELGLFYTMPPVSWSDISYYH
NQILPLIQKYKIVHLNRTDARLANNGLPLEMQKLRCRVNFGALRFTSQIEELGKRVIKLL
RQNGPFLVLHLRYEMDMLAFSGCNQGCSNEEVDELTRMRYAYPWWKEKIINSDLKRKDGL
CPLTPEETALTLRALDIDRDIQIYIAAGEIYGGEKRMASLTAAYPRVVRKETLLDSSDLG
YFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRRFLGFRKTILLDRKLLVDLID
QYNHGSLNWDEFSSAVKEAHSDRMGNPTKRLVIPDRPKEEDYFYANPDECLQSSEMSEER
LEIL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaagatagagaagaggggatatattgaaatggggttgaaatcatttggtggtgag
ggtaaaaaggggattgacaagtttaagagttcaatggtgtcaaggtctaagatgaagctt
tggatgattagagcaactacttgcattttgttgtggacttgtttagttcagttgacaact
ttgagtgagatgtggggagctagagttttaaagggttggccttcttgcttttcccatgaa
tctgctactgctatggatgtcatgatcacaccgtctcttccgactcgagttcttccaccc
aagagggtgtataagaacaatggctatttgatggtttcatgcaatggaggtcttaaccaa
atgcgtgcagcgatatgcgacatggtagctatagcaagatatttaaatgttacgcttatt
gttcctgagctggataaaacttctttctgggctgatccaaggtttgccagattatgcttt
cttttgacattagaaactagacacgatttcagtatgactaagctatatttatatatttct
tatttcatatggcatggcagtgagtttcaggacatttttgatgtcgaccatttcatttca
tcactgagggatgaggttcgtatactgaagcaactgcctcccagagttaagaggagagtg
gaactaggattgttttacacaatgcctcctgtcagttggtctgacatttcttattatcat
aatcaaattctccctctgatccagaaatacaagattgtgcatctgaataggactgatgct
cggcttgccaacaatggtctgccactagagatgcaaaagcttcgatgccgagtaaacttc
ggtgctctgagatttacttctcaaatagaggagttgggaaaaagggtaattaagctctta
aggcagaatggtcctttccttgtacttcatctcagatatgaaatggacatgttagcattt
tcgggttgtaaccagggatgcagcaatgaagaagtagatgagttgacacgaatgagatat
gcctacccatggtggaaagagaaaatcataaattctgacttgaaaagaaaggatggtcta
tgtccattaacccccgaggaaactgctcttacactgagggcactggacattgatcgtgac
atccaaatctacattgccgctggagagatttatggcggagaaaaacgaatggctagtctc
actgctgcttatccaagagtggtcaggaaggaaactcttttggactcgtcagaccttgga
tatttccagaatcactcttctcagatggcagcactcgattatcttgtttctctagaaagt
gatatttttgttccaacatatgatggaaacatggccaaagttgttgaaggccaccgcaga
ttccttggtttcagaaagacgatattattggatagaaagctactagttgatttaatagat
caatataatcacggttccttgaattgggatgaattctctagtgctgttaaggaagcacat
tcagatcgcatggggaaccccacaaaaaggttggtgattccagacagaccaaaggaggaa
gattatttctatgccaaccctgacgaatgcttgcaatcatcagaaatgtcggaggaaaga
ttagaaatcttataa
DBGET
integrated database retrieval system
