Daucus carota (carrot): 108219378
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Entry
108219378 CDS
T05350
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like 1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108219378
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108219378
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
108219378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
RING_XB3-XBAT31
zf-RING_6
DUF848
Prok-RING_4
CdaS_N
Rad50_zn_hook
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
108219378
NCBI-ProteinID:
XP_017248284
LinkDB
All DBs
Position
4:22143319..22160504
Genome browser
AA seq
862 aa
AA seq
DB search
MNPKDNSTISHSKSDSFNHSMEYQLDTKVLQFQNLKLVQKLEAQKVECTALENKYSQLRD
KQLPYDNTLEVVHKAWEEVVIDLESSSKRLKNRAGLCLGARNEFNEDDCSSPREDEFLKR
LVETGATESSFLSNIHSQVNEVRQAVGERTKMILSNLVGGINDLWCLKGGLYASAQNPED
GYCRQNTSIKMEEEVKTLRLLVSDLHLKHRTLSSELQNQRDIDAKNKAQLKHLKAELDST
IAELDESNCRLATLKAEKNAVKGVNFPVLVGNKHVASERARNKQEDLHDMESTLKDLLDQ
SSSRLIELKRLYEERIGLLKQLADLQNTLKSVKFVSSSRAYLLVKDQLAKAKASVLQYQV
LYEKLQVEKDNLAWREKESIMESDVVDVFHQSTIVNEYRIEELEKEIEKQVSSRLLIETK
LEEASREPGRKEIIAEFKALVSSFPDNMRSMQEQLTKYKEVASDVHSLRAEVQSLSDVFN
RKAKEVETLSVRSSDQVAEIKKLQAVVEDLKESDLDLKLILEMYRCESIDSRDISEARTA
ENKAWAQVQSLNSALDEQNLESRVKKAVEAEATTQQKLAAAEAEIADLRQNFENSRREKV
KLSDVLKSKQEENEVYLSEIETIGQAYDDVQTQNQHLLQQITERDDYNMKLVIEGARARQ
LRDTILMEKQTMYRTFQQASSLVDFFETKTSRIEDQARMCSDQVQRLAEDRVQKSVSLEN
TQRRLSDANKSSQRMTKLLEESQSKLARKRDALANLQIELEKERYERKRVEEEVEVARRK
VLRLRSEIEGSPVVQRLQQELKEYKDILKCSICLERPKEVVITKCYHLFCGPCVQKIAEG
RHRKCPVCAASFGANDVKPVYI
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctaaagacaattcaacaatctctcactctaagtccgattctttcaatcattca
atggaataccagcttgatacgaaagtgctccaatttcaaaatcttaagcttgttcagaag
ttagaagctcaaaaggttgagtgtactgctcttgagaacaagtatagtcagctgagggac
aaacaattaccttacgataatacattggaagtggttcataaggcttgggaagaggtcgtc
attgatttggagtcaagttccaaacgcttaaagaaccgtgcgggattatgtttaggtgct
agaaatgaatttaatgaagatgattgctcatctccgcgggaggatgaatttcttaaacga
cttgtagaaactggtgcaacagagagtagctttttgagtaacatccacagtcaggtgaat
gaagttagacaagcagtaggtgaaagaaccaagatgattttatctaatctggtcggcggg
attaatgatctttggtgcttaaagggaggattatatgcttcagctcaaaatccagaagat
ggttactgcaggcagaatacaagtattaaaatggaggaagaggttaaaacacttagattg
ctagtaagtgatcttcatttaaagcatagaacactttctagtgaattgcagaaccagcga
gatatcgatgcgaaaaataaagctcagctgaaacatctaaaagcggagttggacagtact
atagctgaacttgatgaaagcaactgtagactagcaaccttaaaagcagaaaaaaatgct
gtgaagggagtaaatttccctgtccttgtcgggaataagcatgttgctagtgagagggca
aggaataaacaagaagatttgcatgatatggagtctacactgaaggacttgctggatcaa
tcttcttctcgactaattgaactcaaacgtctctatgaagaaagaattggattactaaag
caattagccgatcttcagaatactttgaagagtgtgaagttcgtatcttcctcccgggct
tacttactggtaaaagatcagcttgctaaggcgaaagcatctgtactccagtatcaagtt
ttatatgaaaagttgcaggttgagaaagataaccttgcatggcgggaaaaggagagtatc
atggaaagtgatgtagttgatgtcttccatcaatccacgatagttaatgaatataggata
gaggagttagaaaaggaaatagaaaagcaagttagttcgaggcttttaattgaaactaag
ctcgaagaagcatcaagagaacctggtcggaaggaaattattgcagaattcaaagcattg
gtttcttcgtttcctgataacatgcggagcatgcaagagcaattgactaaatacaaagag
gttgcttctgatgttcattctctgcgagctgaagttcaatctctttcagatgtttttaat
cgaaaggcgaaagaggtggaaacattatctgttagatcttctgaccaggttgctgagata
aagaagttgcaagccgtggttgaagatttgaaggaaagtgatttggacttgaagctaatt
ttagaaatgtatagatgtgaatctattgactcaagggacatctcagaagctaggactgcg
gaaaataaagcgtgggctcaagttcagagcctaaattctgcccttgatgagcaaaatttg
gaatcacgagttaaaaaagctgtcgaagctgaggctactactcaacagaagttagctgct
gcagaagccgaaattgccgatttaagacagaattttgaaaattctaggagggaaaaagtt
aaactttctgatgtgctgaaatcgaaacaagaggagaatgaagtctacctatctgagata
gagactataggacaggcatatgatgatgtacaaactcaaaaccaacatcttttgcagcaa
atcactgaaagagatgactacaacatgaagcttgttatcgagggtgcacgtgcaagacaa
ttgagagatacaattctcatggaaaagcaaaccatgtacagaacatttcaacaagctagt
tcattggttgatttttttgagactaaaacttccaggatagaagatcaggcaagaatgtgc
tcagatcaagttcagagacttgcggaagatagggttcaaaaatcagtttccttggaaaac
acacagaggaggctgtcagatgcgaataaatcatctcagcgcatgacaaaattattggaa
gaatcacaatctaagcttgcaagaaagcgagatgctcttgccaacctgcagatagaactt
gagaaagagagatatgagaggaaaagagttgaagaggaggtagaagttgcaaggagaaag
gttttgcgtttacggtcagaaatagaaggatcacctgtggtccagaggctccaacaagag
cttaaggaatacaaggacatcctgaagtgcagtatttgccttgaaaggccgaaagaggtt
gtaatcacgaagtgctatcacttgttctgtggcccctgtgttcaaaagatcgccgaaggg
aggcatcgcaagtgcccagtctgtgcggcaagctttggggccaatgatgtgaagcctgtt
tatatttaa
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