KEGG   Daucus carota (carrot): 108219388
Entry
108219388         CDS       T05350                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG4
  KO
K16280  E3 ubiquitin-protein ligase RGLG [EC:2.3.2.27]
Organism
dcr  Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dcr04121]
    108219388
Enzymes [BR:dcr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108219388
Ubiquitin system [BR:dcr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108219388
SSDB
Motif
Pfam: Copine zf-C3HC4_3 Prok-RING_4 zf-C3HC4_2 zf-C3HC4 zf-RING_5 vWA-TerF-like zf-RING_2 zf-RING_UBOX Ferritin-like Sina_RING RING_XB3-XBAT31 Ermin
Other DBs
NCBI-GeneID: 108219388
NCBI-ProteinID: XP_063947993
LinkDB
Position
4:complement(43419093..43423482)
AA seq 421 aa
MGNAFSLTAKKRRSLSSDRTRDAGGSSSLRSVSSRNIVSNEAPSVQKKSSFSSRKASSKS
FSYKKTKKYAFIPDYFSTLEEVTEALRESGLESSNLILGIDFTKSNEWTGQVSFNNRSLH
AIGDTRNPYEKAISIVGKTLAPFDEDNLIPCFGFGDATTHDQEVFSFHSDHSPCHGFEEV
LDCYRRVAPKIILSGPTSYGPVVDAAINIVEKSGGQYHILVIIADGQVTRSADIREKELS
PQEEKTIQSIVNASVYPLSIVLVGVGDGPWEDMRKFDDKIPARKFDNFQFVNFTAIMSKN
VTPSEKETAFAIAALMEIPIQYKAAIEFGLVGNVTGKAKKIAPRPPPVPYTPSAVSSSRE
PNNLSSSEEDERNQACAICLTNRKDMAFNCGHMTCRECGLRLSNCPICRQQISSRIRLYT
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggggaatgcattttctttaactgctaaaaaaagacgttcgctatcgtctgatcgcact
agagatgctggcgggagcagtagtttgagatcagtgtcgagccgaaacatagttagtaat
gaagctccttctgtgcagaagaaatcatcgttttcaagtcgtaaagcgagtagtaagagc
ttctcgtacaagaagaccaagaagtatgctttcatcccggattatttctccacgcttgaa
gaggttacagaggctttgagagaatcaggcctggagtcatcaaatcttattcttggaata
gacttcacgaaaagcaatgaatggacagggcaagtctcattcaacaatcgcagcctgcat
gccattggtgatactcgtaatccttatgagaaagccatatccattgttggaaagactttg
gctccttttgatgaagacaacttaataccttgttttgggtttggtgatgccaccactcac
gatcaagaagtgttcagcttccacagtgatcactctccttgccatggatttgaagaagtt
ttagattgctacaggagggtggccccaaaaataatattgtcaggtccaacatcttatgga
cctgtagttgatgctgcaattaatatagtggaaaaaagtggcggacaataccacattctg
gtcattatagcagatggacaggtcacacgtagtgctgatatacgtgaaaaggaactcagt
ccgcaagaagaaaaaacaatacaatcaatcgtcaatgcaagtgtgtatcctctctcaata
gtacttgttggcgttggagatggaccttgggaagatatgagaaaatttgacgacaaaata
cctgcacgtaaatttgataactttcagtttgttaattttacagctattatgtccaaaaat
gtgactccgtcggagaaggaaactgcatttgctattgctgctctcatggagatacccatt
cagtataaagctgccattgagtttggtctagttgggaatgtcacaggcaaagcaaagaaa
attgctccacgtcctcctccagttccctacacgcctagtgcagtgtcttcatccagagaa
ccaaacaatctttcatcatccgaagaagatgaaagaaaccaggcctgtgctatttgcctg
accaacaggaaggacatggctttcaattgcggacacatgacttgtagagaatgtgggttg
agattgtcaaactgtcctatttgccgccagcagattagcagccgtattaggctgtatact
gggtga

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