Daucus carota (carrot): 108219401
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Entry
108219401 CDS
T05350
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP59
KO
K12735
peptidyl-prolyl cis-trans isomerase-like 4 [EC:
5.2.1.8
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108219401
03110 Chaperones and folding catalysts [BR:
dcr03110
]
108219401
Enzymes [BR:
dcr01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
108219401
Spliceosome [BR:
dcr03041
]
Complex C
Other components
PPlases
108219401
Chaperones and folding catalysts [BR:
dcr03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
108219401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
RRM_1
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
108219401
NCBI-ProteinID:
XP_017248316
LinkDB
All DBs
Position
4:27743050..27751027
Genome browser
AA seq
663 aa
AA seq
DB search
MSVLIVTSLGDIVVDLHTDRCPLTCKNFLKLCKIKYYNGCLFHNVQKDFTAQTGDPTGTG
SGGDSIYKYLYGDQARFFGDEIHLDLKHSKTGTVAMASAGQNLNASQFYMTLRDDLDYLD
EKHTIFGEVAEGLETLSRINEAYVDEKGRPYKNIRIKHTYILEDPFDDPPQLAELVPDAS
PEGKPKDEVDDEVRLEDDWVPMDEQLAPGELEEVIRTKEAHSRAVVLESIGDIPDAEIKP
PENVLFVCKLNPVTEDEDLHTIFSRFGTVTSADIIRDFKTGDSLCYAFIEFEDTESCNQA
YYKMDNALIDDRRIHVDFSQSVAKLWSQYRRKDQQNGNKKGCFKCGAPDHIAKDCTGSPT
AKHQPAKYILKDDNTQRGSNNKSSYEMVFDGESGGSPRRSKAHGKYEVEDHNGKPNMNHQ
RPDERKSRDYRNRDSHDRHRHIDREQREDERDGGRNHSRSGRDQGHSRREGKEFRNESGS
IRRDGKVHDEYKKRSLESDSLRDEKHERDYSKRSTVEGSRRDERELKSRSNEKSNPGDRR
DVRHYEKGSAENNSRGDTKDERERKRSVEKESHGGRRDDREYRKRNAETGHHGSRRDERD
YKRRSTDDDVRADQTEDGSERKGKVHDYKRDRRDEPYDRKTHNNSDGHKSSREDQDYEKR
KTK
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttctgatcgtgacaagcctgggcgacatcgtcgttgatttgcacacagaccgc
tgtccattaacgtgcaagaatttcttaaagctctgcaagattaagtattacaatggatgc
ctgtttcacaatgttcagaaggatttcactgcacagacgggtgatcctactgggacagga
tctggcggggactctatttacaaatacttatacggagatcaagctcgctttttcggtgac
gagattcatttggatttaaagcattctaagactggcacagttgctatggccagtgctgga
cagaatctcaatgcttctcagttctacatgacactgcgtgatgatcttgactacctggac
gagaagcacactattttcggggaggttgcagaagggcttgaaacactgagtaggataaat
gaagcttatgtagatgagaagggcaggccatacaaaaatatcagaattaaacacacttat
atacttgaagatccttttgatgatccaccacaacttgctgagcttgtgccggatgcctct
cctgaaggcaaacccaaagatgaggttgatgatgaagtacgacttgaagatgactgggta
cccatggacgagcagttggctccaggagagcttgaagaagttatccgaacaaaggaagca
cattccagagcagtagtgcttgaaagtattggggacattccagatgctgaaataaagcct
cctgagaatgtgttgtttgtttgtaagctaaatccagtaactgaagatgaggatttgcac
acaatcttctcaagatttggaactgttacttcggctgacataatccgggattttaaaact
ggggacagtttatgctatgctttcattgaatttgaagatacagaatcctgcaatcaagca
tattataagatggataatgctctgattgatgatagaaggatacatgttgattttagtcaa
agtgttgcaaagctttggtctcaataccggcgtaaagatcagcagaatggaaacaaaaaa
ggttgctttaaatgtggtgcccctgatcacattgccaaggattgtactggtagcccaact
gcaaagcaccaacctgcaaagtacatcttgaaagatgacaatacccagcgtggtagcaac
aacaagtctagttatgaaatggtttttgatggagaatctggtggaagtccacgacgaagt
aaggctcatggtaaatatgaagtcgaggatcataatgggaaaccaaacatgaaccaccaa
cgtccggatgaacgcaagtccagggattacaggaatagagactctcatgataggcatagg
catattgacagagaacagagagaggatgagagagatgggggtagaaaccattcacgaagt
ggtagggatcaaggtcacagcagaagggaagggaaggagtttagaaacgaaagtggcagt
attcgcagagatggaaaagtgcatgacgagtacaagaaaaggagtttagaaagtgatagt
cttcgagatgagaagcatgagagagattattcaaagaggagtacagttgaaggtagccgt
agggatgaaagagagttaaaaagtaggagtaatgagaagagtaatcccggagataggagg
gatgtcagacattatgaaaagggaagtgcagagaataactcgcgtggagatacaaaagat
gaaagagagcgtaaacggagtgtcgagaaagaatctcatggaggcaggagggatgatagg
gagtacagaaagaggaatgcagagactgggcaccatggaagcaggcgtgatgaaagagat
tataagcgaaggagcacagatgatgatgttcgagctgatcagactgaagatgggagtgaa
agaaagggaaaagtacatgattataagcgagacagaagagatgagccatatgatagaaag
acgcataataattctgatggtcacaaaagcagcagggaggatcaggattatgaaaagaga
aagaccaagtaa
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