KEGG   Daucus carota (carrot): 108219449
Entry
108219449         CDS       T05350                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108219449
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dcr03019]
    108219449
   03041 Spliceosome [BR:dcr03041]
    108219449
Messenger RNA biogenesis [BR:dcr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     108219449
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108219449
Spliceosome [BR:dcr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    108219449
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 OB_RNB
Other DBs
NCBI-GeneID: 108219449
NCBI-ProteinID: XP_017248400
UniProt: A0A165YYE2
LinkDB
Position
4:47046729..47049356
AA seq 363 aa
MDSKSKNSNPRSGDGASPGKIFIGGLPKDTLYNAFTKHFGKYGEITDSVIMKDRHTGVPR
GFGFITYADPSVVDKVIEDPHVFNGKQVEIKRTIPKGAAQSKDFKTKKIFVGGIPATVTG
DELKDFFSKYGNVVEHQIICDHETNRSRGFGFVIFDNEEVVDEMLSKTNMIDMAGTKVEI
KKAEPKKASNHPPAPAYGSKPRARSFSDEFGRFNSSYGGYDSGYVGPGPYRTPGGLGRLS
GYGGYGGASDYGGYGDFGGSALGGYRGESSLGYSSRFGAYAGGYSGGYGGSGLGGYGRAE
GLGSYGRGEGLGGYGRGEGYGSYGGSGYGGGYDSGPGASYGGTGGLYGRGGYSGSSRYHP
YGR
NT seq 1092 nt   +upstreamnt  +downstreamnt
atggattcgaaatctaagaattctaatccccgatcaggcgacggcgccagccccggaaaa
atcttcatcggaggtttgccgaaagatacgctctacaatgcattcacaaaacacttcgga
aagtatggagagattacggactctgtaattatgaaagatcgtcatactggagtacctagg
ggttttggattcatcacttatgctgatccttcagttgtagataaggttattgaagatcct
catgtcttcaatgggaaacaggtcgagattaagagaaccattccaaaaggagctgctcag
tcaaaggatttcaaaacaaagaaaatctttgttggcggtatcccagcaactgttactgga
gatgagcttaaggacttcttttcgaagtatggcaatgttgttgaacaccagattatatgt
gatcacgagaccaaccgttcgcgggggtttgggtttgtaatattcgacaacgaggaagtt
gttgatgaaatgttgtctaagaccaatatgattgatatggcgggcaccaaggtggagatc
aagaaagctgaaccaaagaaagcctcaaaccatccacctgctcctgcttatggtagcaag
cctagggcacgctctttcagtgatgagtttggtcgatttaacagctcttatgggggttat
gatagtggatatgttggccctggcccctataggactccaggtggtctcggcaggcttagt
gggtatgggggatatggtggtgctagtgattatggtggttatggggactttggtggcagt
gccttaggaggctatcgaggtgaatcatcccttggttattctagccgcttcggagcatat
gccggtggatatagtgggggttatggtggcagtgggttaggtgggtatggcagagcagaa
ggcttaggtagttacggcagaggtgagggtttaggtggttatggaagaggtgaaggctat
ggaagctatggtggtagtggctatggtggtggttacgactctggtccaggtgctagttat
ggaggaacaggtggactttatggtaggggtggctatagcggcagtagtaggtaccatccc
tatggaaggtag

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