Daucus carota (carrot): 108219470
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Entry
108219470 CDS
T05350
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108219470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcr02000
]
108219470
04147 Exosome [BR:
dcr04147
]
108219470
04090 CD molecules [BR:
dcr04090
]
108219470
Enzymes [BR:
dcr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108219470
Transporters [BR:
dcr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108219470
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108219470
CD molecules [BR:
dcr04090
]
Proteins
108219470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
Zeta_toxin
ABC_ATPase
AAA_29
RsgA_GTPase
AAA_30
AAA_5
nSTAND1
APS_kinase
SbcC_Walker_B
AAA_25
DUF87
Rad17
Motif
Other DBs
NCBI-GeneID:
108219470
NCBI-ProteinID:
XP_017248429
LinkDB
All DBs
Position
4:32152283..32157855
Genome browser
AA seq
1336 aa
AA seq
DB search
MAQDLEEERQTPTASPSRIIISSARRKLFEILGFELPVSAPGAGEGGPDNIQERDKKNEK
IKKKEEMEAKETDKEKPGSVLPTVKFMELFRFADRLDYVLMVIGSVGAFVHGSALPLFLR
FFADLVNSFGANANDPDKMTQEVVKYAFYFLIVGGAIWVSSWAEISCWMWTGERQTTRMR
IVYLEAVLNQDVQYFDTEVRTSDVVSGINTDAVMVQDAISEKLGNFIHYMATFASGFVVG
FTAVWQLALVTLAVVPVIAVIGGVHTATLSKLSAKSQEALSEAGNIAEQNIAQIRTVVAY
VGESRALKAYSSALKISQRFGYKSGLSKGLGLGATYFTVFCCYALLLWYGGYLVRHHYTN
GGLAISTMFSVMIGGIALGQSIPSMAAFSKARVAAAKVFRIIDHKPSVEKNSKSGLELET
VLGEVEIKNVDFSYPARPDILVLNNFSLCVPAGKTIALVGSSGSGKSTVVSLIERFYDPA
TGQVLLDGNDIKTLKLKWLREQIGLVSQEPALFATSIKENILLGRPDATLEEIEEAATVS
NAHSFIVKLTNGYDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEQ
LVQEALDRFMIGRTTLIIAHRLSTIRKADLVAVLQQGSVTETGTHDELFAKGENGIYAKL
IRMQEIAHETAVNNARKSSARPSSARNSVSSPIMTRNSSYGRSPYLRRLSDFSNSDFSLS
MDTSYPSHHLEKLPFKEHASSFWRLAKMNSPEWIYALVGSVGSVVCGTISAFFAYVLSAV
LSVYYSQDHAYMIKEIEKYCYLLIGVSSAALIFNTMQHFFWDIVGENLTKRVREKMLEAV
LKNEIAWFDQEDNESSTVASRLALDANNVRSAIGDRISVIMQNSALLLVACTAGFVLQWR
LALVLMAVFPIVVAATVLQKMFMEGFSGDLEAIHAKATQLAGEAVGNLRTVAAFNSESKI
VALYVSNLQAPLRRCFYKGQIAGSGYGIAQFLLYASYAVGLWYASWLVKHGISDFSKTIR
VFMVLMVSANGAAETLTLAPDFIRGGRAMQSVFDLIDRKTDIEPDNPDSSFIPDTIRGDV
DLKHVDFAYPSRPDILVFRDLSLRARAGKTLALVGPSGCGKSSVIALIQRFYEPSSGRVM
IDGKDIRKYNLKSLRRHIAVVPQEPCLFATTIYENIAYGHESATEAEIIESATLANAHKF
ISSLPDGYKTFVGERGVQLSGGQKQRIAIARAFTRKAELMLLDEATSALDAESERSVQEA
LERACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLIKNYPDGCYSRMIQLQK
FSHVQVALNIASTSGS
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagatctcgaggaagagagacagactcctactgccagcccgagcagaattatt
atatcttccgcaagacgtaaattattcgaaatcttaggattcgaacttcctgtttcagct
ccaggagcaggagaaggaggcccagataatatacaagagcgtgacaagaaaaatgaaaag
attaagaaaaaagaagaaatggaggccaaggagacagataaagagaagcctggttcagtg
cttcctacagttaagttcatggagcttttcagatttgcagatagactggactatgttctt
atggtcattggaagtgtgggagcttttgtgcatggctctgctttgccattgttccttcgt
ttctttgctgatcttgtcaattcttttggagccaatgctaatgatcctgataagatgacc
caagaagttgttaagtatgcattttactttctaatagtcggaggtgcaatatgggtttct
tcatgggcagagatatcttgttggatgtggactggagagagacaaacgactagaatgaga
attgtgtacctagaagcggtcttgaatcaggatgttcaatatttcgatacggaggttcgg
acatcggatgttgtttctgggattaatacagatgctgttatggtacaagatgctatcagt
gagaagttaggcaatttcatacattatatggcaacttttgcttctggattcgttgtcggt
tttactgctgtttggcagttggctctagtcacgcttgctgtggttcctgttatagctgta
attggaggggttcatacggctacattgtctaagctctctgccaagagccaagaagctctt
tcagaagctggcaatatcgctgaacagaatatagctcaaattcggacagtagttgcgtat
gttggtgaatcaagagcattgaaagcatattcatcggccttgaagatctctcagaggttc
ggatataaaagcgggttatccaagggattaggattaggagctacatacttcactgttttt
tgttgttatgcacttctactctggtatggaggttatctggttagacatcattacaccaat
ggaggacttgccatatctacaatgttctcggttatgattggtggaattgccttggggcaa
tctattccgagcatggctgcattttcaaaggctagagttgcagctgccaaggtctttcgg
attatagaccacaaacctagtgtagaaaagaacagcaaatccggcttggagctcgagact
gttttgggagaagtagagataaagaatgtggatttctcataccctgcgagaccagatatt
cttgtattgaacaatttttcactctgtgttccagctggtaagaccatagctttggttgga
agcagtggctctgggaagagcacagtggtttctctcattgaaaggttctatgatccagcc
acgggtcaagttttgctagatggtaatgacataaagacactaaagcttaaatggttaagg
gagcaaattggactggtgagccaggaaccagctctgtttgctacctctatcaaagaaaac
atactcttgggtcggccagatgcaaccctagaagagattgaagaagcggccacagtttcc
aatgctcattctttcatcgtcaagctcacaaatggctacgacactcaggtaggagaaagg
ggactccaactctcaggtggacagaagcagagaatagctatagcaagagcaatgcttaaa
aatccagcaatcttgcttttggatgaggcaaccagtgcattagattctgagtcagagcaa
cttgtacaagaagcgctcgaccgttttatgattgggaggacaacgctcatcattgcccac
cgcctatcaaccataaggaaggctgatttagttgctgtactgcagcagggcagtgttact
gagactggaacacatgatgagctcttcgccaaaggagagaatggaatctatgccaagctc
atccgcatgcaggaaattgctcatgagactgcagtcaataatgcaagaaagagtagcgca
aggccttctagtgcaagaaactccgtgagttcacctataatgacccggaactcctcttat
ggcaggtcaccatatctccgtcggttatctgatttctctaactctgactttagcctatcc
atggatacatcgtatcccagtcatcaccttgaaaaacttccatttaaggagcatgctagt
tccttttggcgccttgccaagatgaactcccctgaatggatttatgctttggttggttct
gtaggttcagttgtctgtggcaccatcagtgccttctttgcttatgttttgagtgctgtg
ctaagtgtttattacagtcaagaccatgcttacatgataaaagaaattgaaaaatattgc
tacctcttgattggagtctcatcagctgcactaatctttaacacaatgcagcattttttc
tgggatatcgtgggagaaaatttaacaaaacgtgtaagagagaaaatgctggaagcagtg
ctgaaaaacgaaatagcttggttcgatcaggaggataacgagagctccacagttgcttca
aggctggctcttgatgccaataatgtcagatcagccattggggatcgtatttcagtgatc
atgcagaactcggcgctcttgctagttgcatgcacagcagggtttgttctgcagtggcgc
cttgcccttgttctcatggctgttttccccattgttgttgcagctacagttttgcagaaa
atgttcatggaaggattttctggagacttggaagccatacatgccaaagccacacaatta
gctggtgaagctgtgggaaatttaaggactgttgctgctttcaattcagaatccaaaatt
gtggcactttatgtctctaacctccaagcgccattgcgtcgttgtttctataaaggacag
attgctgggagtggatatggaattgcacaatttctactttatgcttcatatgctgttggt
ctttggtatgcctcctggctggtaaagcacgggatctctgatttctcaaagactatccgg
gtatttatggttctgatggtctcagccaatggtgcagctgaaacactaacactagctcct
gacttcatcaggggtggccgagccatgcaatccgtcttcgacctcattgatcgcaaaact
gacattgaaccggataatccagattctagtttcatccctgatactattcgtggagacgtg
gacctaaaacatgtggattttgcttacccctcccgccctgatatattagtgttccgtgac
ctttctcttcgtgctcgagctggcaaaactcttgcccttgtcggtccaagtggatgtgga
aaaagttcagtcattgccctgatacagagattctacgaaccatcatctggacgggttatg
attgatggaaaggacatccgaaagtacaatttgaagtcactgcgacgccacattgcagtg
gtgcctcaagagccgtgcctcttcgccaccaccatttatgaaaacatagcttatggacat
gaatcagcaaccgaagctgagataattgaatcagcaacacttgccaatgcccataagttc
atctcttcattacccgatggctataaaacttttgtgggcgaaagaggggttcaattatct
ggaggacagaagcaaagaattgctattgctcgcgctttcacaaggaaagcagagctcatg
ctactagacgaagccacgagtgcactcgatgcagagtctgaaaggagtgtgcaggaggct
cttgagcgtgcttgctcaggaaagaccacaattgtggttgcacaccgcctctctacgata
agaaatgcccatgtcattgcagtgatagacgacggaaaagtggcagaacaaggttctcac
tctcatctaatcaaaaactaccctgacggatgttactcgcgtatgatacagttgcagaag
ttttcccacgtacaggttgccttaaacatagcatccacctcaggctcctag
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