Daucus carota (carrot): 108219663
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Entry
108219663 CDS
T05350
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 15
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dcr01002
]
108219663
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108219663
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108219663
Peptidases and inhibitors [BR:
dcr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108219663
Ubiquitin system [BR:
dcr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108219663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
108219663
NCBI-ProteinID:
XP_017248641
UniProt:
A0A162A727
LinkDB
All DBs
Position
5:45961166..45969074
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AA seq
900 aa
AA seq
DB search
MLKPRETDIPALFLFFVVFPLVAYYLLGRWSELSKKKETSSLLANCDAEESFRAESMTAA
TLIPLVPLTKVGIHECARCYAPSTTRCSRCKSVRYCSGRCQIMHWRQVHKHECQQLEYSS
SSSSPKDLSDDKPVRERVLFDDNLASGNMQGRHENATTEYMSHQHVSAASLGTAACITPD
ASDPYLMERSVGKQVYLNSKKEKLRKEDETILESSEDACRHSGTVSKEAGNQLGENESNE
KMKANTSSRRSTSRSKMNDTLINGGRLVREGTTCNDEVLYNCSSEGIPTNRSTRAKSGSH
VPGTKMNRLTRSKSRASIELSSPDMERKDQRLDMSEVGRPRGTAPQEGSEVPNTGFSKTS
GLMRSTKHERLESTEVKGDTHKKTKMLFPYEDFVKFFQCRTFNLSPRGLVNCGNSCYANA
VLQCLTYTKPLTIFFLRRTHSRTCCSKDWCLMCELEQHVAMLTESGGPLSPSRLLSHMGS
INRHISYGSQEDAHEFLRYVVTSMQSICLEKLGGENKLDTKLQETTFIHHTFGGRLISKV
KCLRCYHESERSEIFMDLTLEIFGWVESLQDALTQFTSAEALDGDNMYKCGRCAEYVRAE
KKLCIQEAPNILTIVLKRFQEGNYGKINKCITFPEMLDMIPFMTGADDIPPLYILYAVVV
HIDMLNAAFSGHYITYLKDMQGSWFRIDDTEVQPVEMSQVMSEGAYILFYMRSSPRPGSG
QTGSLVQHQSSGLPKQRSSKTQKLARLGHSRSGSHFVSSEPSAGHRPEMPNHPYKWIHSS
SNSDIRAPYMDNYPRSRTMDFSDATSSDWSIFTSSDDASFTTDSTRDSFSTVDHADAGNM
DLSASLFNSFCAPEYPSHKTVSCSRFSGSKFRERFVHEENGNVYDSGNDDKWNQVSFPSS
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagccaagagaaactgatatacctgccctctttctgttcttcgttgtgttccct
ctggttgcttactacttactaggacgatggagtgagttatcaaaaaagaaggaaacgtca
agcttacttgctaattgcgatgctgaagaatcttttagggcagaatcaatgacagcggca
actctcatccctcttgttcctttgacaaaagttggaattcatgaatgtgctagatgctat
gctccatctacaacccgttgctctcggtgcaagtctgttcgctactgttctgggaggtgt
cagataatgcattggaggcaagttcacaagcatgagtgtcagcaactagaatacagcagc
agcagctcgtctccgaaggatctctcagatgataaacctgtgcgtgaaagggtcttattt
gatgacaatttagcatctggcaatatgcagggtagacatgagaatgctaccactgaatat
atgagtcatcaacatgtcagcgcagcttcattagggactgctgcttgcattactccagat
gcatctgacccttacctgatggagcgatctgttggcaagcaggtgtacctgaattcgaag
aaggaaaagctaagaaaagaggatgagacgatattagagtcttccgaagatgcttgcagg
catagcggtacagtttccaaggaagctggaaatcagttgggagaaaatgaaagtaacgag
aagatgaaagcaaatacaagtagtagacgcagtacttcaagaagtaaaatgaatgatact
ttgattaatggagggcgcctagttagggagggaactacttgcaatgatgaagtcttgtat
aactgttcatctgaaggaattccaacaaatagaagcactagagctaaaagtggttcacat
gtacctggaaccaaaatgaatagattaaccagatcaaagtcgagagcatcaattgagcta
tcatctccagatatggaaagaaaggatcaacgtttggacatgtcagaggttggtagaccg
aggggtactgctccccaggaaggcagcgaagttccaaatacaggattttcaaagacgagt
gggttaatgaggtcaacaaaacatgaaagactggaatccactgaagttaagggcgatact
cataagaaaaccaagatgctatttccatatgaagattttgtgaagttcttccagtgtaga
acattcaatttatcgcctagaggtcttgtaaattgtggaaacagctgttatgctaatgcg
gtgttgcaatgtttaacctatacaaagcctctgaccatcttttttctccgtcgaacacat
tcaagaacttgttgcagtaaagattggtgcctcatgtgtgaacttgagcaacatgttgca
atgctaacagaaagtggaggcccgctgtctcccagcagacttttatcgcatatgggtagt
ataaatcgccacattagttatggaagtcaggaagatgcacatgaatttttaaggtatgtc
gttacttcaatgcaatctatatgcctggagaaattgggtggagaaaacaagttagatacc
aaattgcaggaaacaacctttatacaccatacttttggaggacgtcttatatccaaggtc
aaatgtttaagatgttatcacgagtcagaacgatctgaaatctttatggatttgacattg
gaaatttttggttgggtcgagtcgttgcaagatgcattaacccagtttaccagtgcagaa
gctttggatggagataacatgtacaaatgcggaaggtgtgctgaatatgtccgagccgag
aagaagttgtgcatacaggaagctcctaatatcttgacgatagtcttaaaaagatttcag
gaaggaaactatggaaagataaacaagtgtattactttcccagagatgctggatatgata
cctttcatgaccggggcagatgatattcctccactttacattctttatgctgttgttgtg
catatagatatgcttaatgcagctttctccgggcactacattacctacttgaaagatatg
caaggcagttggttcaggatagatgacactgaggtccagccggtggagatgagccaggtc
atgtctgaaggagcatatatattattctatatgaggtcctctcctcgccctggaagtggt
caaactggtagccttgttcagcaccaatcctctggtcttccaaagcaacgatcatctaaa
acacagaagttggcgagactaggacatagtagatctggtagccactttgtcagctctgag
ccatctgccggtcataggcccgaaatgcctaaccatccctataaatggatacatagtagt
tcaaacagcgacattagagcaccttatatggataattacccaagatcaagaaccatggat
ttttcagatgctacatcaagtgattggtccattttcaccagttcagatgatgcatccttt
actactgacagtaccagagactcctttagcacagtggatcatgccgatgcaggcaacatg
gatctcagtgcgtctttattcaacagcttttgtgccccagagtacccctcccataaaact
gtgtcgtgcagtaggttcagtggcagtaagttccgggaaagatttgttcatgaagagaat
ggtaacgtttatgattctggcaatgatgacaaatggaatcaggtcagttttccttcatcg
tag
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