KEGG   Daucus carota (carrot): 108219700
Entry
108219700         CDS       T05350                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 12
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03020  RNA polymerase
dcr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108219700
  09124 Replication and repair
   03420 Nucleotide excision repair
    108219700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dcr03021]
    108219700
   03400 DNA repair and recombination proteins [BR:dcr03400]
    108219700
Transcription machinery [BR:dcr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     108219700
  RNA polymerase III system
   RNA polymerase III
     108219700
  RNA polymerase I system
   RNA polymerase I
     108219700
DNA repair and recombination proteins [BR:dcr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      108219700
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 Zn_Ribbon_YjdM HypA Zn_ribbon_13 DUF5816 DZR DUF1451 Prok-RING_1 Trissin CoiA_N A2L_zn_ribbon Cas12f1-like_TNB
Other DBs
NCBI-GeneID: 108219700
NCBI-ProteinID: XP_017248690
UniProt: A0AAF0X7Y5
LinkDB
Position
5
AA seq 51 aa
MDSQPEPVNYICGDCGQENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
NT seq 156 nt   +upstreamnt  +downstreamnt
atggattctcagcccgaacccgtcaactacatttgtggagattgtggacaagaaaacacg
ctgaagccgggtgatgtaatacagtgccgtgagtgtggttatcgtatcttgtacaagaag
cgcacccgcagaattgtccagtatgaagcccgttga

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