Daucus carota (carrot): 108219709
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Entry
108219709 CDS
T05350
Name
(RefSeq) putative chloride channel-like protein CLC-g
KO
K05016
chloride channel 7
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108219709
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108219709
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dcr04040
]
108219709
Protein phosphatases and associated proteins [BR:
dcr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108219709
Membrane trafficking [BR:
dcr04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
108219709
Ion channels [BR:
dcr04040
]
Chloride channels
Chloride channel (CLC)
108219709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
108219709
NCBI-ProteinID:
XP_017248699
UniProt:
A0AAF1B013
LinkDB
All DBs
Position
5:28730267..28734511
Genome browser
AA seq
770 aa
AA seq
DB search
MSTADVNGNEDYVTQPLLLHRSPSNLTSQVAIVGSNLCPIESLDYEINENELFKEDWRSR
GKVQFVQYVFMKWILCLLIGFIVSAIAFCNNLAVENLAGMKFVVTSNMMLAQKFASAFAV
FAASNFGLTLFACLITAFIAPEAAGSGIPEVKAYLNGVDAPAIFSLKTLLVKIVGSIAAV
SSSLHVGKAGPMVHTGACIAAITGQGGSKKYKLTWRWLRYFKNDRDRRDLVTCGSAAGMA
AAFRAPVGGVLFALEEMASWWRSALVWRSFFTTAVVAIVLRALIDICLSGRCGLFGTGGL
IMYDVTSANVTYHLSDVPPVLLLGVIGGILGSLYNYILEKVLRLYNLINEKGIAYKILLA
CSISILTSCLLFGLPWLASCQPCPADASEPCPTIGRSGNYKKFQCQPGHYNDLASLFFNT
NDDAIKNLFSKDTDAEFQHTSIILFFITCFFLSIFSYGIVAPAGLFVPVIVTGASYGRFV
GMLVGSHSNLNHGLFAVLGSASFLGGSMRMTVSLCVIILELTNNLLLLPLIMIVLLISKT
VADAFDENIYDLIMKLKGFPYLETHAEPYMRQLTVGDVVTGPLQLFHGIEKVGNIVHVLK
TTGHNGFPVIDEAPFSESPVLFGLILRAHLMTLLKKKAFLLTPVRTDISAFKHFSANDFA
KKGLSKRDNIEEIKLTAEEMEMYIDLHPYTNASPYTVVESMSLAKALILFREVGLRHLMV
IPKISGKWPVVGILTRHDFMPEHILGLHPMLSSSRWRRLRINFSQTDRRV
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccgccgacgtgaacggaaacgaggattacgtcacccagccactcctgctccac
cgatcaccttccaacctcacctctcaagttgccatcgtcggctccaatctctgtcctatc
gaaagcctcgactatgagataaatgagaatgagttgttcaaggaagactggaggagtaga
ggcaaagtacagtttgttcaatatgtgttcatgaaatggatactttgtttgttgatcgga
ttcattgttagtgctattgctttctgtaacaatcttgctgtcgagaatctcgctggcatg
aagttcgttgtcacttccaatatgatgttagctcaaaagtttgcgtcggcctttgctgtg
tttgctgcttccaattttggtcttaccttgtttgcttgtttaattactgcttttattgct
cccgaagctgccggttctggcattcctgaagttaaggcttacttgaatggcgttgatgct
ccagctattttctctctcaaaacacttcttgttaagatagtcggtagcattgctgctgtc
tcgtcatctcttcacgttggaaaggcaggaccaatggtgcatactggagcatgcattgct
gcaatcacaggtcagggagggtctaagaaatataaattaacatggagatggttacgatat
ttcaagaacgaccgagacaggagagatcttgtcacatgtggctctgctgctgggatggct
gctgcttttcgtgccccggttggtggtgtgctgtttgctcttgaagaaatggcatcttgg
tggagaagtgcacttgtatggagatctttcttcacaacagctgttgtcgccattgtgctc
cgggcattaattgatatctgtttgagcggcagatgtggactatttggaactgggggtctt
ataatgtatgatgtgacctccgctaatgtaacttatcatctttctgatgttcctccggtt
cttcttcttggagtcataggaggtattttggggagtttgtacaattatattttggaaaag
gtactccggttgtacaatctgattaatgaaaaaggcattgcttataagatacttcttgct
tgctcgatttccattcttacatcctgtcttctgtttggattaccgtggcttgcatcttgc
cagccttgccctgctgatgcatcagaaccttgcccaacaattggtcgatctggtaattac
aagaagtttcagtgtcaacctggtcattacaatgatcttgcaagcctcttttttaacaca
aatgacgatgcaatcaaaaacttatttagtaaagacaccgacgctgaattccaacacaca
tcaattatcttatttttcatcacctgcttcttcctcagtatctttagttatggaatcgtc
gctcctgctggtctctttgttcccgtaattgtgaccggcgcttcttatggacgctttgtt
ggaatgttggttggttcacattcaaatttaaaccatggtctttttgcggtcctaggttcc
gcttcatttcttgggggatcgatgaggatgactgtttcattatgtgtcattatcttagaa
ttaaccaataatcttctgttgttaccgctgataatgattgtccttctgatttctaagaca
gtagctgatgcgttcgatgaaaatatatatgatcttattatgaagttaaagggcttccca
tatctagaaactcatgctgaaccatacatgagacagttgacagttggagatgttgtcaca
ggtccactacagctctttcatggcattgagaaggttggtaatatagtacatgttctgaag
actacagggcataatggttttcctgtgatagatgaagctccattttctgaatcccctgta
ttatttggtctgatccttcgtgctcatcttatgacattgttaaagaaaaaagctttcttg
cttactcctgtgcgaacagatattagtgctttcaagcacttctcagcaaatgattttgcc
aagaaaggtcttagcaagcgtgacaacatagaagaaattaagttgactgcagaagagatg
gagatgtatatcgacttgcatccgtacaccaatgcttcaccttatactgttgtggagtcg
atgtcattagcgaaggcactcatactttttcgagaagttggtctgagacatctgatggtg
atacccaagatatccggcaaatggccagtggtgggcatattgacaaggcatgatttcatg
ccagaacatatactgggtctgcacccgatgttgtcaagtagcaggtggagaagattaagg
atcaacttctcgcaaacggacagaagggtttag
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