KEGG   Daucus carota (carrot): 108219776
Entry
108219776         CDS       T05350                                 
Name
(RefSeq) uncharacterized protein LOC108219776
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108219776
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dcr03019]
    108219776
   03041 Spliceosome [BR:dcr03041]
    108219776
Messenger RNA biogenesis [BR:dcr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     108219776
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108219776
Spliceosome [BR:dcr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    108219776
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 RRM_RdRP1_2 RRM_SRRT
Other DBs
NCBI-GeneID: 108219776
NCBI-ProteinID: XP_017248776
UniProt: A0AAF0X8D8
LinkDB
Position
5
AA seq 376 aa
MGSRGASDNPRFGDGASPGKIFIGGLSKETTLDTFVKYFGKYGEITDSVIMKDRMTGRPR
GFGFITYADPSVVDTVIVETHIINDKQVEIKRTIPKGSSDSKDFKTKKIFVGGIPTSVTE
EELKDFFSKYGNVVEHEIIRDHTTKRSRGFGFVVFDSEQVVDNILVDTNKIDMGGTKVEI
KKAEPKKSSNPAPGPAYGSEPRGRSYGDTFGGYGDSFSNYSADRFGPPSYRSYGGMSDRH
GDFGGYGGGFSGRYGDFGGRYGDLGGRYGDYGGYRGEPSPGYSSRYGSLGGGVGGGVGGG
YGESGLGSYGRGGVGGGYGGSGLISYGRGGVGGYGAYGGPGGDYEAGPGPSYGGAGGVYG
SKGGYGGSSRYHPYGR
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgggttcaaggggggcttctgataaccctagatttggcgatggagctagtcccggaaag
attttcattgggggtttgtcgaaagagaccacactagatacatttgtcaagtactttggg
aagtatggagagattacggactctgttattatgaaagatcgaatgactggtcggcctagg
ggttttgggtttattacttatgctgatccatctgtcgtcgacactgtcattgttgaaact
catatcattaacgacaaacaagttgagatcaaaagaacaattcctaaggggtcatcagat
tccaaagattttaaaaccaagaaaatatttgttggtggcatacctacatctgttactgaa
gaagagttaaaagatttcttttcgaagtatggcaatgtggttgagcatgaaatcatacga
gatcatacgaccaagcgttccagaggcttcggttttgtagtatttgacagtgagcaggtt
gttgacaatatcttggtggatacgaacaaaattgatatgggcggtacaaaggttgagatc
aaaaaggccgaacccaagaaatcctcaaatccggcacctggccctgcatatggtagtgaa
cctagggggcgttcttacggtgatacttttgggggttatggtgactcctttagcaattac
agtgctgataggtttggtccaccttcatatagatcatatggtgggatgtctgataggcat
ggagattttggtggatatggtggtggatttagtgggcgttatggggactttggtgggaga
tacggggacttgggtggtagatatggagactatggtggttatcgtggagagccctcacct
ggctactctagtcgctatggatcccttggtggcggtgttggcggtggtgtcggtggtggt
tatggtgaaagtgggttaggttcatatggccgtggaggtgttggtggcggatatggtgga
agtgggttaatttcatacggccggggtggtgttggaggctatggagcttacggtggacct
ggtggtgattatgaagccggtccaggtcctagttatggcggggcagggggagtgtatgga
agtaagggaggttatggtggcagtagtcgttaccatccgtatggcaggtag

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