Daucus carota (carrot): 108219827
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Entry
108219827 CDS
T05350
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108219827
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
108219827
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
MOEP19
Motif
Other DBs
NCBI-GeneID:
108219827
NCBI-ProteinID:
XP_017248849
UniProt:
A0AAF0X6C0
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Position
5:complement(31353887..31361535)
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AA seq
445 aa
AA seq
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MASVDPTDTPAVATTSPKTESQLGAAATTESEPRKWPGWPGDTVYRLIVPVMKVGSIIGR
KGDAIKKLCEETRARVRVLEGPAASPDRIVLISGKEEPEAVLSPAMDAVLRIAKRVNGLP
ESDEDSKVSGAASIAFCSVRLLVLSPHATNLIGKQGTTIKSIQESSGASIRVLSNDEVPT
YVSSDEKVVEVQGEAIKVIKALESVVGHLRKFLVDHSVLPLFEKNNNSTMVPQMVSQDRQ
VENWADRTMMRSNIDAGIGSNDYPLLLKREAQFIERERNLDSKLSLSGLSNYGQDSGLYG
MSSSGRGLAGGPIITQVAQTMQIPLTYCDDIIGVGGSKIAHIRRTSGAILTVQESMGLPD
EITVEIKGNSAQVQVAQQLIQECVNNHKEVIPRSYGMTELESRSLYSQMKNSYPSTSFGS
QQYETQYPYGSSGLGGLGGYGSYRM
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgtagaccccaccgacacacccgccgtcgcaacgacgtcgcccaagaccgag
tcacaactcggtgcggccgccacaaccgagtcggagccaaggaagtggccgggttggccc
ggagacacagtatatagactgatagtaccggttatgaaagtagggagtataattgggcga
aaaggagacgcaattaagaagctttgtgaggagactcgggcccgtgttcgtgttcttgag
ggtcctgctgcctctcctgatcgaattgttttgatatctggtaaagaggagccggaggcg
gtcctatcccctgcaatggatgcggtactgagaattgctaagcgtgttaatggactgcct
gagagtgatgaagattctaaagtatctggagctgcttcgattgcattttgttcggtacgg
ttattggtgctttctccacacgctactaacctgattggaaaacagggtactacgattaag
tcaatacaggagagctctggtgcctccattcgggttctttcaaatgatgaagtcccaacc
tatgttagttctgatgaaaaggttgtagaggttcaaggagaggctataaaggttattaaa
gctcttgaatctgtggtgggacacttgaggaaatttttggttgatcacagtgttcttcca
ttgttcgagaagaataacaatagtacaatggtcccacaaatggtgtcacaagatcggcag
gttgaaaattgggctgacaggacaatgatgcgctctaatattgatgctggaataggtagc
aatgattatcctcttttgctaaagagggaggctcaatttattgaacgtgaaagaaatctc
gactccaaactctctttgtctgggttgtcgaattatgggcaagatagtggactttatggg
atgtcttcttcagggcgtggtcttgcaggtggacctattataactcaggttgcacaaacg
atgcaaattccgctcacatattgtgatgatatcattggagtaggagggtccaagattgca
catattcgacgtaccagtggtgctattctcactgtgcaagagagtatgggtctaccagat
gaaatcactgtggaaattaaagggaactctgcacaagttcaggttgctcaacagcttatt
caggaatgtgtaaacaaccacaaggaagttatccccagaagttatggcatgacagaattg
gaatcgaggtcattgtactcacagatgaagaatagttatccatcaacttcgtttggaagt
caacaatatgaaactcagtatccttacggatcatccggtctaggaggactaggaggatat
ggtagctacaggatgtga
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