Daucus carota (carrot): 108219838
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Entry
108219838 CDS
T05350
Name
(RefSeq) myosin-11-like isoform X1
KO
K10357
myosin V
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108219838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108219838
04131 Membrane trafficking [BR:
dcr04131
]
108219838
03029 Mitochondrial biogenesis [BR:
dcr03029
]
108219838
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dcr04812
]
108219838
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108219838
mRNA cycle factors
P-body specific factors
108219838
Membrane trafficking [BR:
dcr04131
]
Others
Actin-binding proteins
Myosins
108219838
Mitochondrial biogenesis [BR:
dcr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108219838
Cytoskeleton proteins [BR:
dcr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108219838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
108219838
NCBI-ProteinID:
XP_017248868
LinkDB
All DBs
Position
5:30303924..30320566
Genome browser
AA seq
1551 aa
AA seq
DB search
MATAENIIVGSHVWIEDPEIAWIDGQVTKINGQEVQIDTTKGNSVVAKLSSIYPKDEDAP
DGGVDDMTKLSYLHEPGVLQNLSTRYKLNEIYTYTGSILIAINPFQKLPHLYNSHMMQQY
KGSQLGELSPHVYAIAEVAYRAMIREGKSNSILVSGESGAGKTETTKQLMQYLAYLGGRK
GTEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKQGRISGAAIRTYLLE
RSRVCQVSDPERNYHCFYLLCGGPAEVVEKYKLGSSKTFHYLNQSKCHELAGVNDTQEYI
ATRRAMDIVGISETEQEAIFRVVASILHIGNISFAKGSEVDSSILKDDKSKFHFETAVEL
LKCDRKGLEDALLKRVMVTPEEVIKRSLDPVAAVVGRDGLAKTLYSRLFDWLVDKINTSI
GQDPNSKSLIGVLDIYGFESFKQNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEAID
WSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLYQTFKAHKRFVKPKL
SRTDFTIAHYAGEVQYQSEQFLDKNKDYVVPEHQDLLSASKCPFVAGLFPPLPEETTKSS
KSSKFSSIGSRFKVQLQQLMETLNSTEPHYVRCVKPNNLLKPSIFENVNIMQQLRCGGVL
EAIRISCAGYPTRKTFFEFSNRFALLVPEVQEGNLEEKVACEKILKKMELAGAQIGKTKV
FLRAGQMAELDARRALKLSGAAKIIQRKIRTYITRKYFLALREAAISVQAFSRGKLACKL
YENMRREDASIKIQKKARGHSARMSYKNLRISAVMVQTGIRAMSCRKEFRFKKRDTAATT
IQARWRGHRCFAYYKKLIKAAILTQCRWRGRVARKELRKLKMAAKETGALQEAKNKLEKT
VEELTWRMQLEKRMRTDLEEAKGQEISKMQNSLEQMQAKIDEANALVVKEREAAQKAIEE
AAAAVKETQVPVEDTAKIEELSAEVETLKSSLQSEKERADDLERKNQASEESNEEKRQKL
EESEKKVQELQRSCRSLDEKLNNLESENKVLRQQALSIAENSKALQDLEAENKNLRQKVL
TMAQSHKMLAANRSKSVIQRGETTKAAIDLPTPPIKQLKEQAAEVEERPQKSLNEKQQEY
QDLLMRCIAQHLGFSKGRPVAACIIYKCLRQWRSFEVERTSIFDRIIQTIGHAIETQDNN
ETLAYWLSNASTLLLLLQRTLKAGGAAGVTPQFRRQPSLFGRMTQSFRGTPAGVDLSFAS
GESTGGVDTVQVEAKYPALLFKQQLTAYVEKMYGMIRDNLKKEISPLLGLCIQAPRISRA
SLIKGTARTLANAAAQEILTAHWQGIVKNIENFLNMLKSNHVPPFLVRKVFIQTFSFINV
QLFNSLLLRRECCSFSNGEYVKNGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIH
QKPRKSLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSLSPDVISAMRVLMTEDSNNAV
SSSFLLDDDSSIPFSVEDIAKSMDQIAISDIDPPPLIRENAGFTFLLPRAD
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atggctacggcagaaaatatcattgtcggttctcatgtttggattgaagatccagaaata
gcttggatcgatggacaagttacaaagattaatggacaagaagttcagatagataccact
aaaggaaattcggttgttgcgaagttatctagcatttatccaaaggatgaggacgctcca
gatggtggagtcgatgacatgacaaagctatcttatctgcatgagcctggagtcctgcag
aacctgtcaaccagatataaactcaatgaaatctatacatacaccggaagtattcttatc
gcaattaatccatttcaaaagttacctcacttgtataatagtcacatgatgcaacaatac
aaaggatctcaacttggagaactgagtcctcatgtgtatgcaattgcggaagttgcttac
agggcaatgataagagaaggtaaaagcaactcaatattagtcagtggagaaagtggggct
ggcaaaactgaaaccactaagcagcttatgcagtatcttgcttatttgggtggtcgaaaa
ggcactgaaggccggactgttgagcaacaagttctagaatccaatccagttctagaggct
tttggaaatgcgaaaactgttagaaacaacaattccagtcgttttggtaaattcgtcgag
attcagtttgacaaacaagggagaatatcaggcgcagcaattagaacctatcttctagag
agatctcgggtttgccaggtttcagatcctgaacgtaactatcattgtttttaccttctt
tgcggaggtccagcagaggtagtggagaaatacaagctgggaagttctaaaacgtttcac
tatcttaatcaatctaaatgccatgaacttgcgggtgttaatgatacccaagagtatatt
gccactaggagagccatggatatagtcggcataagcgaaacagaacaggaagcaattttc
agagttgttgcttcgattctccatattggtaatatttcgtttgctaaggggtcagaagtt
gattcatcaattttaaaagatgacaaatcgaagttccatttcgagacagcggtagaactt
ctcaagtgtgatcgtaaaggattggaggatgcactgttgaagcgcgtgatggtgacccca
gaagaagttatcaagagaagccttgatcctgtggcagcagttgttggcagagatggttta
gctaagactttatattcacggttgtttgactggttggtagataagattaatacatcaatt
ggacaggatcctaattcaaaatccttgataggtgttcttgacatctatggtttcgaaagc
ttcaagcagaacagttttgaacagttttgtattaatttcacaaatgagaagttgcaacaa
cattttaaccagcatgtgttcaagatggaacaagaagagtacaccaaagaggcgattgat
tggagttacatagaatttgttgataaccaagatgtgctggatcttattgaaaagaaacct
ggaggaattattgctttacttgatgaagcctgcatgtttcccaagtcaactcatgaaaca
ttttcgcaaaagctttaccagacgttcaaagctcacaaacgctttgtcaaacccaaatta
tcacggactgattttactattgcgcattatgctggagaggttcaatatcagtctgaacag
tttcttgacaaaaataaagactatgttgttcccgaacatcaagatttgttaagtgcttct
aagtgcccctttgtagcaggtctcttcccaccattacctgaagagacaactaagtcatca
aaatcatccaaattctcatccataggatcaaggtttaaggtacaactacaacaattgatg
gaaacacttaattctacagaaccccattacgttagatgtgtgaagcccaacaatcttctt
aagccctctatatttgagaatgtgaatatcatgcaacaactgcgctgtggtggtgttcta
gaggcaattaggataagttgtgctggatatccaactcgcaagacctttttcgaattttca
aatcgatttgctcttcttgttccagaagttcaggaagggaatcttgaggaaaaggtagca
tgcgaaaagattttgaaaaagatggaactcgcaggtgctcagatagggaaaacaaaagtt
ttcttaagagctggacagatggctgagttagatgcacggagagctttaaagcttagtggt
gcagccaagattattcaacgaaagattagaacttatattactcggaaatattttcttgct
ctgagagaggccgccatttctgtgcaagctttcagtagaggaaaacttgcttgcaaatta
tacgaaaatatgagaagggaagacgcctctatcaaaatacagaaaaaagcacggggacac
tctgcgaggatgtcctacaaaaaccttagaatctcagctgttatggtccagacaggtata
agggccatgtcttgccggaaggagtttagattcaagaagcgagatactgcggcaacaacg
atacaagcccgctggcgtggtcatagatgctttgcatactataagaaattgataaaggcc
gcaatactcacacaatgccgatggagagggagggttgctaggaaggagcttcggaaatta
aaaatggctgcaaaggaaacaggagcactccaggaagcaaagaataagctcgagaaaaca
gtggaagaacttacatggcgtatgcagctggaaaagcgtatgaggactgatttagaagaa
gcaaaaggacaagagatatcaaaaatgcagaattcgctggagcaaatgcaagctaaaatt
gatgaagcaaatgcattggttgtcaaggaacgggaagctgcacaaaaagcaattgaagag
gcggctgcagcagttaaggaaacccaagtccctgtagaagatactgcaaagattgaagaa
ttaagtgcagaagtggaaaccttaaagtcatcattgcaatctgaaaaagagcgagctgat
gatttggaaagaaaaaatcaagcatctgaggagtcaaatgaagaaaagcgccagaagctg
gaagaaagtgaaaaaaaagttcaagaacttcagcgatcttgtagaagtcttgacgagaag
ctcaacaacttggagtctgaaaacaaagtccttcgtcagcaagctctttccatagcagag
aacagtaaggccctacaagatttagaggcagaaaataaaaatcttcgtcagaaggttttg
accatggcacaaagtcataagatgctcgctgccaatcgctctaaatcagttattcagaga
ggagaaaccacaaaagctgctatagatctcccaactcctccaataaaacagctgaaggaa
caggcagcagaggtagaggagagaccccaaaaatcactgaacgaaaaacagcaagagtat
caggatttgcttatgcgttgtattgcacagcaccttggattttctaaaggcaggcctgtt
gcagcctgcatcatatacaaatgcctgaggcagtggagatcatttgaagtagaaaggact
agtatttttgatcgaatcatacaaacaattggccatgctattgagacacaggacaacaat
gaaactttagcatattggttatcaaatgcatcgactctgttgctcttgctgcaacgtaca
ctaaaagccggtggcgctgctggtgtaactccacagtttaggcgacagccatctttattt
gggaggatgacacagagctttcgtggaactccagctggtgttgacctttcttttgccagt
ggtgagtcgactggtggggtggatacagtacaagttgaagccaaatatcctgctttgctt
tttaaacagcaattgacagcttatgttgaaaagatgtatggcatgattcgtgataatcta
aagaaagagatttctccactgcttggtttgtgcatccaggcccccagaatttccagagca
agcttaatcaaggggacagctcgcacacttgcaaatgctgcagcacaagaaattttgact
gctcactggcaagggattgtgaagaatatcgaaaatttcttaaatatgttgaaatctaat
catgtacccccatttttggttcgcaaagtgttcattcagacgttctctttcatcaacgta
caactatttaacagccttcttttgagaagagaatgctgctcatttagcaacggcgagtat
gtcaagaatggattagcagaactggaacattggtgctacaaggcaacagatgagtatgca
ggttcggcctgggatgagctaaagcatataagacaggctattggattcctggtgatacat
cagaagccaagaaagtcactggatgaaataagtcatgacctatgcccagtgctcagtatt
caacaactctacagaatcagcactatgtactgggatgacaagtatggtacacatagcctt
tctccagatgtaatatctgccatgagggtgttaatgactgaagattcaaacaatgctgtc
agcagctcttttttgcttgatgatgattcaagcataccgttctcagttgaagatatcgct
aaatcaatggatcagattgccatttcagacattgatccgccacctctgattcgggaaaac
gcaggattcacttttctattgcctcgtgctgactga
DBGET
integrated database retrieval system
