Daucus carota (carrot): 108219958
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Entry
108219958 CDS
T05350
Name
(RefSeq) SWR1-complex protein 4 isoform X1
KO
K11324
DNA methyltransferase 1-associated protein 1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108219958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dcr03036
]
108219958
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
108219958
NuA4 complex
108219958
Chromatin remodeling factors
SRCAP complex
108219958
SWR1 complex
108219958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SANT_DAMP1_like
Myb_DNA-binding
DMAP1
Myb_DNA-bind_6
PRC2_HTH_1
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
108219958
NCBI-ProteinID:
XP_017249049
LinkDB
All DBs
Position
5:complement(33488196..33496681)
Genome browser
AA seq
451 aa
AA seq
DB search
MDAKDILGIPKTTPSLPHEKKSRPPKDSQRKPDGISREVYALTGGLAPLMPSIDVNQLKK
KTQAENEKITWQWLPFTSSARKDNLQLYHWVRVVNGVPPTGDYSFAKYNKSIDVIKYTDE
EYEKFLEDPAWTREETDQLFDLSARFDLRFVVIADKLPYSRTVEELKNRYYSVSRAILIA
RAASPADVSGHPLVKEPYNLAQETERKRALSMILSQSKHQERRDAEVYAEAKKIMEARMA
AKAAQDSELIPISTGGAGDAERDNVNVDDESPSNPQFLSAPPISIAETASASASLRKLRV
YLRTYGFEQMVQAASSSAGLRTIKRVEQILQDLGVNMKPKVPTKTVCEEHLELRKEILTL
LNLQKQFQYKEAEGSSYREGSYPETPGTPKSFQRILDQDRTFIPDSTCFGAEFSGEHIVK
RDQKRKAPGRPTDASSSPANKRPRKLKNTDE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaagatatactgggaatccccaaaacgacaccgtctttgcctcacgaaaag
aaatccaggccccctaaagactctcaacgaaagcccgatggcatttcacgcgaggtatat
gcacttactggaggcttggcaccgcttatgccgtcgatcgatgttaatcagttgaagaaa
aagactcaagctgagaatgagaagatcacatggcagtggcttccttttactagttctgcc
cgcaaagataatttgcaactttaccactgggtcagagttgtaaatggtgtgcctcctaca
ggtgattattcctttgccaagtataacaagtcaattgatgtcatcaaatacactgatgag
gaatacgaaaagttcttggaggatcctgcatggaccagggaagaaactgatcagttattc
gatttgtctgcccgctttgatcttcgttttgttgtgatagctgataagctaccatattct
cgaaccgtggaagaacttaaaaatcgttattatagtgtttcacgagctatattgattgcc
agagctgcttctcctgctgatgtttctgggcatcctcttgttaaggaaccatacaaccta
gctcaagagacagagcgcaagcgtgcattgtccatgattctttcacagtcgaaacaccaa
gagcgcagagatgctgaggtttatgctgaagcaaagaagattatggaggcacgaatggct
gcaaaggctgcccaagattctgaattgatccctatatcgactggtggtgctggagatgct
gagagggacaatgttaatgtggatgatgaatcgccttctaaccctcagtttttatctgcc
cctccaatctctattgctgagactgcctcagcttcagcttcgttgcgcaagcttcgggtc
tatttgaggacctatggatttgagcaaatggttcaagctgcaagctcatcagccggactt
cgaactatcaaacgagttgagcaaatattacaagatcttggggttaatatgaaaccgaag
gttccgaccaaaactgtttgtgaagagcatctggaattaagaaaagagatacttactctt
ttgaatcttcagaaacagtttcagtacaaggaggctgaaggttcatcttaccgtgagggt
tcatatcccgagacaccaggaactccaaaaagtttccagcgtattttagatcaggatcgg
acattcattccagactccacatgttttggagctgaattttcaggggaacacattgtaaaa
agggatcagaaacgcaaggcaccgggaaggccaactgatgcctcatcttcgccagcaaac
aaaaggccgagaaagctaaaaaacacagatgaataa
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