Daucus carota (carrot): 108219959
Help
Entry
108219959 CDS
T05350
Name
(RefSeq) solanesyl diphosphate synthase 3, chloroplastic/mitochondrial isoform X1
KO
K14066
geranyl diphosphate synthase [EC:
2.5.1.1
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00900
Terpenoid backbone biosynthesis
dcr01100
Metabolic pathways
dcr01110
Biosynthesis of secondary metabolites
Module
dcr_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
108219959
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dcr01006
]
108219959
Enzymes [BR:
dcr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
108219959
Prenyltransferases [BR:
dcr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
108219959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
HEPPP_synt_1
Sugar_transport
Motif
Other DBs
NCBI-GeneID:
108219959
NCBI-ProteinID:
XP_017249052
UniProt:
A0AAF1B4E2
LinkDB
All DBs
Position
5:43967935..43975208
Genome browser
AA seq
428 aa
AA seq
DB search
MSLFRGLSRISRSSYNQCRFIYSLPRHHHPLQQQLSHGHSNQFVSHFDSNRKVLGCRIIY
SWISGAFTSIGQQVQYQSNSMVDSTEQVDPFSIVADELSILAERLRSMVVAEVPKLASAA
EYFFKLGVEGKRFRPTVLLLMATALNLPISAPVLDNGVHMLSTELRTRQQCIAEITEMIH
VASLLHDDVLDDADTRRGIGSLNAVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAT
VVEHLVTGETMQMTTTSEQRLSMEYYLQKTYYKTASLISNSCKAIALLAGQTAEVSVLAF
DYGKNLGLAFQLIDDVLDFTGTSSSLGKGSLSDIRHGIVTAPILFAIEEFPELRPIVDRG
FDKPGDVDLALDYLGRSHGIQRTRELAQKHANLASSAIDSLPDNDDEDVQISRRALVELT
QRVITRNK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgtttcggggattatctcggatttcgaggtcgagttacaaccagtgtagattt
atatactcgctgccacgtcatcaccatcctctacaacaacaactctctcatggccattct
aatcagtttgtatctcattttgattccaatcgcaaggttctgggttgcagaataatttat
tcatggatttcgggtgcctttactagtattggacaacaggtgcaatatcaaagcaactcc
atggttgactcgacggaacaagttgacccattttctatagttgccgatgaactatctatt
cttgccgagaggttacggtcaatggtggtagctgaggtgccaaagcttgcctcagctgcc
gagtatttctttaaacttggtgttgaaggaaagaggtttcgaccaacggttttgttgttg
atggcaacagctttaaatttaccaatatccgctccagttcttgacaacggtgttcatatg
ttgtctacagaattacgtacaagacagcagtgtatagctgagataacagaaatgatccat
gtcgccagtcttcttcacgatgatgtattggatgatgctgatacaagacgtggaatcggt
tcattgaacgctgtaatggggaataagttagcagtattggccggagatttcttgctgtcc
agagcgtgtgtcgctcttgcatctttgaagaacacggaggttgtgtcacttctagcaaca
gtagtggagcatcttgttacaggggagaccatgcaaatgaccactacttctgagcaacgc
cttagtatggagtattatctgcaaaagacatactacaagaccgcatcactgatttcgaac
agctgcaaggcaattgctcttcttgcagggcagacagctgaagtttcagtgttggctttt
gattatggaaaaaatcttggtctggcatttcaactaatagatgatgttcttgattttact
gggacatcatcttctctggggaagggttccttgtctgatatccgccatggtatcgtgact
gctccaatattgttcgctatcgaggaatttccagaattgcgtccaatcgttgatcggggg
tttgacaaacctggagatgtagatcttgctctagattatctagggcggagtcatggaata
cagaggacacgggaattagcacagaagcatgccaacctcgcttcaagtgcaatcgattct
ttacctgacaatgatgatgaggacgttcaaatatcaaggcgggcattggtagaattaacg
caaagagtcattacgagaaataaataa
DBGET
integrated database retrieval system