Daucus carota (carrot): 108220012
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Entry
108220012 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108220012
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108220012
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108220012
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108220012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-C3HC4_2
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
108220012
NCBI-ProteinID:
XP_017249133
UniProt:
A0AAF1B104
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All DBs
Position
5:complement(17576343..17580312)
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AA seq
185 aa
AA seq
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MDGPPANDWCSICHNNFDVPCQANCSHWFCGNCILQVWSHGPTLQPCLCPLCRRQITLIV
PTESSLQQLHDPEVSEILGKVQTYNRMFGQRSDGLIQRLQDLPFLLRRLLREMMDPQRSL
PLVIRARVYLAMIISAIYIVSPIDIIPEGVLGVIGLLDDFIIALICFLHVAALYRSVLVF
RHGGS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggacggacctccggccaacgattggtgttctatatgccataacaatttcgatgttccc
tgtcaagccaattgctctcactggttttgtggtaattgcatattacaagtttggagtcat
ggacctacacttcagccttgcctctgtcctttatgtcgtcgtcaaatcactttgatagtt
cctactgagtcttcattgcagcagcttcatgatcccgaggtttctgaaatcctagggaag
gttcagacatacaaccgtatgtttggccaacggtcagatggcctcattcagagattgcaa
gatcttccttttctcctcaggagattgttgcgagaaatgatggaccctcaaagatctcta
ccacttgtaatcagagcacgggtctatttggcaatgataatcagtgccatctacattgta
agccccatagacatcattccagaaggtgtgctgggagtaattggtctcttggatgatttt
attattgctcttatctgcttcctgcatgttgctgctctttatcggtcagtacttgttttt
cgccatggtggttcatga
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